LOCUS VTR91311.1 194 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 2 -5 rna ligase : Uncultured bacterium
genome assembly Metasoil_fosmids_resub OS=uncultured bacterium
PE=4 SV=1: LigT_PEase: LigT_PEase protein.
ACCESSION LR593886-612
PROTEIN_ID VTR91311.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_64030"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KKZ4|A0A090KKZ4_9BACT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-36 ;
Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R085|D2R085_PIRSD ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=2'-5' RNA ligase
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_3795 PE=4 SV=1 ; EVALUE=3e-35 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F8ADI8|F8ADI8_THEID ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=2'-5' RNA ligase
OS=Thermodesulfatator indicus (strain DSM 15286 / JCM
11887 / CIR29812) GN=Thein_0990 PE=4 SV=1 ; EVALUE=3e-33 ;
Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A5D3U3|A5D3U3_PELTS ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=2'-5' RNA ligase
OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM
10971 / SI) GN=LigT PE=4 SV=1 ; EVALUE=6e-33 ;
Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0LLA5|A0LLA5_SYNFM ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=2'-5' RNA ligase
OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
GN=Sfum_2529 PE=4 SV=1 ; EVALUE=2e-32 ;
Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|S4Y191|S4Y191_SORCE ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_30905
PE=4 SV=1 ; EVALUE=3e-32 ; Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A9FR36|A9FR36_SORC5 ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum (strain So ce56)
GN=sce5087 PE=4 SV=1 ; EVALUE=8e-32 ;
Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L0DMN3|L0DMN3_SINAD ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=2''-5'' RNA ligase
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_5974 PE=4 SV=1 ;
EVALUE=1e-31 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|R4KCG8|R4KCG8_9FIRM ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=2'-5' RNA ligase
OS=Desulfotomaculum gibsoniae DSM 7213 GN=Desgi_1374 PE=4
SV=1 ; EVALUE=1e-31 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A3ZLX4|A3ZLX4_9PLAN ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=2'-5' RNA ligase
OS=Blastopirellula marina DSM 3645 GN=DSM3645_10167 PE=4
SV=1 ; EVALUE=6e-31 ; Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F6B8D7|F6B8D7_DESCC ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=2'-5' RNA ligase
OS=Desulfotomaculum carboxydivorans (strain DSM 14880 /
VKM B-2319 / CO-1-SRB) GN=Desca_1857 PE=4 SV=1 ;
EVALUE=1e-30 ; Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|I3IHG6|I3IHG6_9PLAN ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=2'-5' RNA ligase
OS=planctomycete KSU-1 GN=KSU1_B0304 PE=4 SV=1 ;
EVALUE=4e-30 ; Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|X1HIC6|X1HIC6_9ZZZZ ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_S07038 OS=marine sediment
metagenome GN=S03H2_38098 PE=4 SV=1 ; EVALUE=6e-30 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F4HLC4|F4HLC4_PYRSN ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=Putative integral
membrane transport protein OS=Pyrococcus sp. (strain NA2)
GN=PNA2_0635 PE=4 SV=1 ; EVALUE=7e-30 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|X0WGI2|X0WGI2_9ZZZZ ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S08690 OS=marine sediment
metagenome GN=S01H1_37362 PE=4 SV=1 ; EVALUE=1e-29 ;
Q/S_length_ratio=1.032"
/note="Pfam_scan:hit_1 (10..94);
Pfam:PF02834.11:LigT_PEase;
Pfam_type:Family;HMM_aln_Length:82; HMM_Length:87;
EVALUE:1.1e-20; BITSCORE: 73.3"
/note="Pfam_scan:hit_2 (96..180);
Pfam:PF02834.11:LigT_PEase;
Pfam_type:Family;HMM_aln_Length:81; HMM_Length:87;
EVALUE:2.5e-07; BITSCORE: 30.5"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0016874"
/note="Enzyme_Code:EC:3.1.4"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:3.1.4.37"
/note="Enzyme_Code:EC:6.5.1"
BEGIN
1 MKRTRTFIGV DVGAAIRGSA TALQRELAKI ATGVKWVTPE NMHVTLLFLG EVDDRELHAV
61 CKAVKAVAAS EPPFSLRVSG VGAFPTPRRP KVLWGGVTDG AEPLQRLYTD LEEEMLELGC
121 YRTEERGYTP HLTLGRINSP EDGFALATEI PKRMAWQGGR FAVEEVVVYC SEMDRDGPVY
181 TVLGRAPLTG KARS
//