LOCUS VTR91231.1 481 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana carbohydrate-selective porin : Carbohydrate-
selective porin OprB OS=Pedosphaera parvula (strain Ellin514)
GN=Cflav_PD0649 PE=4 SV=1: OprB protein.
ACCESSION LR593886-532
PROTEIN_ID VTR91231.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_64830"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B9XQZ0|B9XQZ0_PEDPL ;
ALN/Q_length_ratio=0.859 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0649
PE=4 SV=1 ; EVALUE=1e-126 ; Q/S_length_ratio=1.064"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5TQT9|M5TQT9_9PLAN ;
ALN/Q_length_ratio=0.707 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula sp. SWK7 GN=RRSWK_01370 PE=4 SV=1 ;
EVALUE=1e-118 ; Q/S_length_ratio=1.411"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SZ12|D5SZ12_PLAL2 ;
ALN/Q_length_ratio=0.815 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_4102 PE=4 SV=1 ; EVALUE=1e-110
; Q/S_length_ratio=0.921"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0DGZ8|L0DGZ8_SINAD ;
ALN/Q_length_ratio=0.919 ;
DESCRIPTION=Carbohydrate-selective porin OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_4340 PE=4 SV=1 ; EVALUE=3e-96 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A3ZR18|A3ZR18_9PLAN ;
ALN/Q_length_ratio=0.805 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_21107 PE=4 SV=1 ; EVALUE=6e-81 ;
Q/S_length_ratio=1.140"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6C291|A6C291_9PLAN ;
ALN/Q_length_ratio=0.873 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_03109
PE=4 SV=1 ; EVALUE=2e-77 ; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L0DK95|L0DK95_SINAD ;
ALN/Q_length_ratio=0.790 ;
DESCRIPTION=Carbohydrate-selective porin OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5108 PE=4 SV=1 ; EVALUE=2e-76 ;
Q/S_length_ratio=1.050"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A090MHU1|A0A090MHU1_9BACT ;
ALN/Q_length_ratio=0.798 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-64 ;
Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5TX98|M5TX98_9PLAN ;
ALN/Q_length_ratio=0.892 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula sallentina SM41 GN=RSSM_04703 PE=4 SV=1
; EVALUE=7e-62 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5T9E7|M5T9E7_9PLAN ;
ALN/Q_length_ratio=0.786 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula sp. SWK7 GN=RRSWK_01615 PE=4 SV=1 ;
EVALUE=5e-59 ; Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5SAZ4|M5SAZ4_9PLAN ;
ALN/Q_length_ratio=0.778 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula europaea SH398 GN=RESH_00635 PE=4 SV=1 ;
EVALUE=9e-58 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M2AA35|M2AA35_9PLAN ;
ALN/Q_length_ratio=0.778 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula europaea 6C GN=RE6C_05995 PE=4 SV=1 ;
EVALUE=1e-57 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F0ST63|F0ST63_PLABD ;
ALN/Q_length_ratio=0.790 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_1663 PE=4
SV=1 ; EVALUE=3e-57 ; Q/S_length_ratio=1.043"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5DCT7|K5DCT7_RHOBT ;
ALN/Q_length_ratio=0.778 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula baltica SH28 GN=RBSH_04091 PE=4 SV=1 ;
EVALUE=5e-57 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L7C7G4|L7C7G4_RHOBT ;
ALN/Q_length_ratio=0.778 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula baltica SWK14 GN=RBSWK_06478 PE=4 SV=1 ;
EVALUE=1e-56 ; Q/S_length_ratio=1.006"
/note="Pfam_scan:hit_1 (132..481); Pfam:PF04966.7:OprB;
Pfam_type:Family;HMM_aln_Length:369; HMM_Length:371;
EVALUE:1.5e-32; BITSCORE: 113.1"
/note="GO_domain:GO:0005575"
/note="GO_domain:GO:0006810"
/note="GO_domain:GO:0003674"
BEGIN
1 MRKLYFGLLA TVAVGLTHTG RGTAQNPPAV PPAVLPDGLP TAVPADPLTV TQPPAPQPGS
61 PGAFDALQGI TGCAPAEPPT PPAPPPYGGP FLERQKLLGG WFGARERLRD HGVTLDIHST
121 NIISDLANGG LRESFQQRGR IDYLMHVDGE KAGLWKGSFI DLHAEMAYGT AISGYTGALE
181 PANIAQILPT PNGYVGALTG VKFTQALSER FITFFGKINT AEAFNQPFTG GALGVDGFMN
241 GGLTIPAVLV RTIPYSTYGA GFAYLKGTDP VFSFSLFDAN NTPTRDGFDT FFDNGVVFVP
301 QINIPTKFFG LPGHQGITGS YSTKRYGIID RTAFINPILG LTAPTKSGSW ALTYNFDQTL
361 YAAPDNLKRS WGTFGNLGLA DQNPSPFRWF ANIGFGGSSP IASRKLDTFG VGYYYLGLNN
421 ALQNLAPRLL PFRDHEQGVE LFYNCAVTPW CHLTPDVQFV IPAQKRADAL TVFGLRAKID
481 F
//