LOCUS VTR91222.1 169 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana single-stranded dna-binding protein
: Single-stranded DNA-binding protein OS=Phycisphaera
mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01)
GN=ssb PE=4 SV=1: SSB protein.
ACCESSION LR593886-523
PROTEIN_ID VTR91222.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_64920"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|I0IET8|I0IET8_PHYMF ;
ALN/Q_length_ratio=0.645 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Phycisphaera mikurensis (strain
NBRC 102666 / KCTC 22515 / FYK2301M01) GN=ssb PE=4 SV=1 ;
EVALUE=3e-24 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B4CYA0|B4CYA0_9BACT ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_1541 PE=4 SV=1 ; EVALUE=5e-20 ;
Q/S_length_ratio=0.934"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|C8PLH8|C8PLH8_9PROT ;
ALN/Q_length_ratio=0.615 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Campylobacter gracilis RM3268
GN=CAMGR0001_1987 PE=4 SV=1 ; EVALUE=1e-19 ;
Q/S_length_ratio=0.858"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5SQI8|D5SQI8_PLAL2 ;
ALN/Q_length_ratio=0.740 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_2626 PE=4
SV=1 ; EVALUE=8e-19 ; Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6CAL9|A6CAL9_9PLAN ;
ALN/Q_length_ratio=0.645 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Planctomyces maris DSM 8797
GN=PM8797T_17342 PE=4 SV=1 ; EVALUE=2e-18 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F0SN41|F0SN41_PLABD ;
ALN/Q_length_ratio=0.645 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Planctomyces brasiliensis (strain
ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM
1448) GN=Plabr_3473 PE=4 SV=1 ; EVALUE=3e-18 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|W0J168|W0J168_9BACT ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Opitutaceae bacterium TAV5
GN=OPIT5_19655 PE=4 SV=1 ; EVALUE=2e-17 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|I6APS3|I6APS3_9BACT ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Opitutaceae bacterium TAV1
GN=OpiT1DRAFT_01441 PE=4 SV=1 ; EVALUE=2e-17 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A3ZL43|A3ZL43_9PLAN ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_08762 PE=4 SV=1 ; EVALUE=4e-17 ;
Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q476D2|Q476D2_CUPPJ ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Cupriavidus pinatubonensis (strain
JMP 134 / LMG 1197) GN=Reut_A0369 PE=4 SV=1 ; EVALUE=4e-14
; Q/S_length_ratio=0.934"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A069PY91|A0A069PY91_9BURK ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Burkholderia glathei GN=BG61_01145
PE=4 SV=1 ; EVALUE=5e-14 ; Q/S_length_ratio=0.949"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|G8M3I5|G8M3I5_9BURK ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Burkholderia sp. YI23
GN=BYI23_A002730 PE=4 SV=1 ; EVALUE=7e-14 ;
Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B2AGW6|B2AGW6_CUPTR ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Cupriavidus taiwanensis (strain R1
/ LMG 19424) GN=ssb1 PE=4 SV=1 ; EVALUE=1e-13 ;
Q/S_length_ratio=0.949"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|R7XAN3|R7XAN3_9RALS ;
ALN/Q_length_ratio=0.657 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Ralstonia sp. GA3-3 GN=C265_27914
PE=4 SV=1 ; EVALUE=3e-13 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q1LRM5|Q1LRM5_RALME ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=Single-stranded
DNA-binding protein OS=Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839) GN=ssb1 PE=4 SV=1 ;
EVALUE=5e-13 ; Q/S_length_ratio=0.934"
/note="Pfam_scan:hit_1 (4..114); Pfam:PF00436.20:SSB;
Pfam_type:Domain;HMM_aln_Length:103; HMM_Length:104;
EVALUE:4.5e-22; BITSCORE: 77.8"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
BEGIN
1 MANLNKVILI GRLTGDPKST PFKTGGMVAK FGFAVTNRKK NSQSGQWEDD PMFIDVEVFN
61 RGDTGKLADL VMDKLKKGSQ VMLEAKLHLD QWDDKNGGGK RSKHKLVVDN LQLLDPRSEG
121 GGGGGGYGGR SSGSGSSGGR SGGSAPPDDG DDYGGDGGNS GGGNDPIPF
//