LOCUS VTR91221.1 171 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 30s ribosomal protein s6 : 30S ribosomal
protein S6 OS=Rhodopirellula baltica SWK14 GN=rpsF PE=
3 SV=1: Ribosomal_S6 protein.
ACCESSION LR593886-522
PROTEIN_ID VTR91221.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_64930"
/note="BLAST_uniprot:hit_4 ; ACCESSION=Q7UKV1 ;
ALN/Q_length_ratio=0.743 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula baltica (strain SH1) GN=rpsF
PE=3 SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=1.221"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|K5DA21|K5DA21_RHOBT ;
ALN/Q_length_ratio=0.743 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula baltica SH28 GN=rpsF PE=3
SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=1.221"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F2AMF7|F2AMF7_RHOBT ;
ALN/Q_length_ratio=0.743 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula baltica WH47 GN=rpsF PE=3
SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=1.221"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L7CAY6|L7CAY6_RHOBT ;
ALN/Q_length_ratio=0.743 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula baltica SWK14 GN=rpsF PE=3
SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=1.221"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5S0U1|M5S0U1_9PLAN ;
ALN/Q_length_ratio=0.737 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula europaea SH398 GN=rpsF PE=3
SV=1 ; EVALUE=4e-23 ; Q/S_length_ratio=1.221"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M2ALV1|M2ALV1_9PLAN ;
ALN/Q_length_ratio=0.737 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula europaea 6C GN=rpsF PE=3 SV=1
; EVALUE=4e-23 ; Q/S_length_ratio=1.221"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5UFH8|M5UFH8_9PLAN ;
ALN/Q_length_ratio=0.766 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula sallentina SM41 GN=rpsF PE=3
SV=1 ; EVALUE=5e-21 ; Q/S_length_ratio=1.248"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5T9E6|M5T9E6_9PLAN ;
ALN/Q_length_ratio=0.754 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula sp. SWK7 GN=rpsF PE=3 SV=1 ;
EVALUE=1e-20 ; Q/S_length_ratio=1.248"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5RQ02|M5RQ02_9PLAN ;
ALN/Q_length_ratio=0.713 ; DESCRIPTION=30S ribosomal
protein S6 OS=Rhodopirellula maiorica SM1 GN=rpsF PE=3
SV=1 ; EVALUE=1e-17 ; Q/S_length_ratio=1.179"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L0D8P6|L0D8P6_SINAD ;
ALN/Q_length_ratio=0.667 ; DESCRIPTION=30S ribosomal
protein S6 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rpsF PE=3
SV=1 ; EVALUE=8e-14 ; Q/S_length_ratio=1.267"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D2R6N8|D2R6N8_PIRSD ;
ALN/Q_length_ratio=0.632 ; DESCRIPTION=30S ribosomal
protein S6 OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=rpsF PE=3 SV=1 ; EVALUE=1e-10 ;
Q/S_length_ratio=1.305"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E8R1N8|E8R1N8_ISOPI ;
ALN/Q_length_ratio=0.561 ; DESCRIPTION=30S ribosomal
protein S6 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=rpsF PE=3 SV=1 ; EVALUE=5e-10 ;
Q/S_length_ratio=1.276"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q1Q7G9|Q1Q7G9_9BACT ;
ALN/Q_length_ratio=0.485 ; DESCRIPTION=30S ribosomal
protein S6 OS=Candidatus Kuenenia stuttgartiensis GN=RpsF
PE=3 SV=1 ; EVALUE=7e-10 ; Q/S_length_ratio=1.248"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A3ZL44|A3ZL44_9PLAN ;
ALN/Q_length_ratio=0.573 ; DESCRIPTION=30S ribosomal
protein S6 OS=Blastopirellula marina DSM 3645 GN=rpsF PE=3
SV=1 ; EVALUE=3e-09 ; Q/S_length_ratio=1.204"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I0IET9|I0IET9_PHYMF ;
ALN/Q_length_ratio=0.591 ; DESCRIPTION=30S ribosomal
protein S6 OS=Phycisphaera mikurensis (strain NBRC 102666
/ KCTC 22515 / FYK2301M01) GN=rpsF PE=3 SV=1 ;
EVALUE=4e-09 ; Q/S_length_ratio=1.069"
/note="Pfam_scan:hit_1 (4..97);
Pfam:PF01250.12:Ribosomal_S6;
Pfam_type:Domain;HMM_aln_Length:88; HMM_Length:92;
EVALUE:1.1e-14; BITSCORE: 54.0"
/note="GO_domain:GO:0003735"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0019843"
/note="GO_domain:GO:0006412"
BEGIN
1 MPKQTYETLF LLDPTKVSAD ADGVKQQLHT LIERHGGHVD ISRPWDYNHK LTYPIGKSKK
61 GSFHIIYYTF ESTSQAELER DFALQEGLIL RQLTSKLDPK WKEEILRIAR EDTGNGFALR
121 GMQDEQTVQT DPSAIGGDVM GEEGGLPPRG DRGEGGGGPR RGRRDMAEKP E
//