LOCUS VTR91219.1 213 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 50s ribosomal protein l25 : 50S ribosomal
protein L25 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rplY PE=
3 SV=1: Ribosomal_L25p: Ribosomal_TL5_C protein.
ACCESSION LR593886-520
PROTEIN_ID VTR91219.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_64950"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D8T0|L0D8T0_SINAD ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=50S ribosomal
protein L25 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rplY PE=3
SV=1 ; EVALUE=1e-42 ; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6CAM2|A6CAM2_9PLAN ;
ALN/Q_length_ratio=0.915 ; DESCRIPTION=50S ribosomal
protein L25 OS=Planctomyces maris DSM 8797 GN=rplY PE=3
SV=1 ; EVALUE=6e-38 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8R1P0|E8R1P0_ISOPI ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=50S ribosomal
protein L25 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=rplY PE=3 SV=1 ; EVALUE=4e-34 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|I3II57|I3II57_9PLAN ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=50S ribosomal
protein L25 OS=planctomycete KSU-1 GN=rplY PE=3 SV=1 ;
EVALUE=2e-31 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C1A7Q0|C1A7Q0_GEMAT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=50S ribosomal
protein L25 OS=Gemmatimonas aurantiaca (strain T-27 / DSM
14586 / JCM 11422 / NBRC 100505) GN=rplY PE=3 SV=1 ;
EVALUE=3e-31 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5T913|M5T913_9PLAN ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=50S ribosomal
protein L25 OS=Rhodopirellula sp. SWK7 GN=rplY PE=3 SV=1 ;
EVALUE=2e-30 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A075WY11|A0A075WY11_9BACT ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=50S ribosomal
protein L25 OS=Thermodesulfobacterium commune DSM 2178
GN=rplY PE=3 SV=1 ; EVALUE=5e-30 ; Q/S_length_ratio=1.070"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5UA74|M5UA74_9PLAN ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=50S ribosomal
protein L25 OS=Rhodopirellula sallentina SM41 GN=rplY PE=3
SV=1 ; EVALUE=5e-30 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q1Q7H1|Q1Q7H1_9BACT ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=50S ribosomal
protein L25 OS=Candidatus Kuenenia stuttgartiensis GN=RplY
PE=3 SV=1 ; EVALUE=2e-29 ; Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|I0GIM2|I0GIM2_CALEA ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=50S ribosomal
protein L25 OS=Caldisericum exile (strain DSM 21853 / NBRC
104410 / AZM16c01) GN=rplY PE=3 SV=1 ; EVALUE=9e-29 ;
Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|D5SQJ1|D5SQJ1_PLAL2 ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=50S ribosomal
protein L25 OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=rplY PE=3 SV=1 ;
EVALUE=3e-28 ; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A098R552|A0A098R552_9SPIO ;
ALN/Q_length_ratio=0.817 ; DESCRIPTION=50S ribosomal
protein L25 OS=Spirochaeta sp. JC230 GN=rplY PE=3 SV=1 ;
EVALUE=3e-28 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|J3D930|J3D930_9BURK ;
ALN/Q_length_ratio=0.836 ; DESCRIPTION=50S ribosomal
protein L25 OS=Herbaspirillum sp. CF444 GN=rplY PE=3 SV=1
; EVALUE=2e-27 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F6B4H7|F6B4H7_DESCC ;
ALN/Q_length_ratio=0.887 ; DESCRIPTION=50S ribosomal
protein L25 OS=Desulfotomaculum carboxydivorans (strain
DSM 14880 / VKM B-2319 / CO-1-SRB) GN=rplY PE=3 SV=1 ;
EVALUE=2e-27 ; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I3CRM8|I3CRM8_9BURK ;
ALN/Q_length_ratio=0.836 ; DESCRIPTION=50S ribosomal
protein L25 OS=Herbaspirillum sp. GW103 GN=rplY PE=3 SV=1
; EVALUE=3e-27 ; Q/S_length_ratio=1.054"
/note="Pfam_scan:hit_1 (7..92);
Pfam:PF01386.14:Ribosomal_L25p;
Pfam_type:Domain;HMM_aln_Length:87; HMM_Length:88;
EVALUE:4e-22; BITSCORE: 78.1"
/note="Pfam_scan:hit_2 (99..184);
Pfam:PF14693.1:Ribosomal_TL5_C;
Pfam_type:Domain;HMM_aln_Length:81; HMM_Length:88;
EVALUE:4.9e-21; BITSCORE: 74.7"
/note="GO_domain:GO:0003735"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0019843"
/note="GO_domain:GO:0006412"
BEGIN
1 MSDSVTLKTT PRTESGSRAA IKLRKQGLVP AIVYGHKLAN AQVAVNAEEL DRAIRIQHVR
61 VLDLDINGKV ETVLIRELQW DYLGKQMIHV DFERKDRSEL VRVTVPVELR NAPKQTGGGV
121 LDQPLHALHV ECPLGNIPEA IRIDITNLTL GNPIHVRELA LPEGVKALEA AEAVVVQLKL
181 PGIEPVATAT TEPGAGPEVI KPEKKKAEDA DEK
//