LOCUS VTR91056.1 781 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana helicase snf2 : RNA polymerase-associated
protein RapA OS=Candidatus Accumulibacter sp. SK-01 GN=
rapA PE=4 SV=1: SWIM: SNF2_N: Helicase_C protein.
ACCESSION LR593886-357
PROTEIN_ID VTR91056.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_66580"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I6AIJ2|I6AIJ2_BURTH ;
ALN/Q_length_ratio=0.921 ; DESCRIPTION=Helicase, Snf2
family protein OS=Burkholderia thailandensis MSMB43
GN=A33K_15103 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A084XU57|A0A084XU57_9PROT ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=RNA
polymerase-associated protein RapA OS=Candidatus
Accumulibacter sp. SK-01 GN=rapA PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|C6HV11|C6HV11_9BACT ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=DNA/RNA helicase,
SNF2 family OS=Leptospirillum ferrodiazotrophum
GN=UBAL3_74420081 PE=4 SV=1 ; EVALUE=1e-179 ;
Q/S_length_ratio=0.948"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A091ACZ4|A0A091ACZ4_9DELT ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Uncharacterized
protein OS=Smithella sp. F21 GN=KN63_07350 PE=4 SV=1 ;
EVALUE=1e-178 ; Q/S_length_ratio=0.931"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A011QE04|A0A011QE04_9PROT ;
ALN/Q_length_ratio=0.857 ; DESCRIPTION=RNA
polymerase-associated protein RapA OS=Candidatus
Accumulibacter sp. BA-93 GN=rapA_2 PE=4 SV=1 ;
EVALUE=1e-177 ; Q/S_length_ratio=0.913"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A011PP52|A0A011PP52_9PROT ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=RNA
polymerase-associated protein RapA OS=Candidatus
Accumulibacter sp. BA-92 GN=rapA_2 PE=4 SV=1 ;
EVALUE=1e-176 ; Q/S_length_ratio=0.865"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|C7RM65|C7RM65_ACCPU ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Non-specific
serine/threonine protein kinase OS=Accumulibacter
phosphatis (strain UW-1) GN=CAP2UW1_3893 PE=4 SV=1 ;
EVALUE=1e-175 ; Q/S_length_ratio=0.928"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5F6Q4|M5F6Q4_9RHIZ ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=DNA/RNA helicase,
SNF2 family OS=Mesorhizobium sp. STM 4661 GN=MESS4_360063
PE=4 SV=1 ; EVALUE=1e-173 ; Q/S_length_ratio=0.941"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|J5MJT0|J5MJT0_9RHIZ ;
ALN/Q_length_ratio=0.855 ; DESCRIPTION=Non-specific
serine/threonine protein kinase OS=Rhizobium sp. CCGE 510
GN=RCCGE510_23174 PE=4 SV=1 ; EVALUE=1e-171 ;
Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5EPG7|M5EPG7_9RHIZ ;
ALN/Q_length_ratio=0.855 ; DESCRIPTION=DNA/RNA helicase,
SNF2 family OS=Mesorhizobium metallidurans STM 2683
GN=MESS2_30043 PE=4 SV=1 ; EVALUE=1e-170 ;
Q/S_length_ratio=0.932"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E6QUU2|E6QUU2_9ZZZZ ;
ALN/Q_length_ratio=0.866 ; DESCRIPTION=Putative Helicase,
Snf2 family OS=mine drainage metagenome GN=CARN7_1822 PE=4
SV=1 ; EVALUE=1e-167 ; Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|I2EQF8|I2EQF8_EMTOG ;
ALN/Q_length_ratio=0.853 ; DESCRIPTION=SNF2-related
protein OS=Emticicia oligotrophica (strain DSM 17448 /
GPTSA100-15) GN=Emtol_0759 PE=4 SV=1 ; EVALUE=1e-164 ;
Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L8JN98|L8JN98_9BACT ;
ALN/Q_length_ratio=0.855 ; DESCRIPTION=Uncharacterized
protein OS=Fulvivirga imtechensis AK7 GN=C900_05783 PE=4
SV=1 ; EVALUE=1e-162 ; Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5TUK9|M5TUK9_9PLAN ;
ALN/Q_length_ratio=0.835 ; DESCRIPTION=Helicase, Snf2
family protein OS=Rhodopirellula sallentina SM41
GN=RSSM_05715 PE=4 SV=1 ; EVALUE=1e-159 ;
Q/S_length_ratio=0.852"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D5SV66|D5SV66_PLAL2 ;
ALN/Q_length_ratio=0.802 ; DESCRIPTION=SNF2-related
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_3539 PE=4 SV=1 ;
EVALUE=1e-159 ; Q/S_length_ratio=0.896"
/note="Pfam_scan:hit_1 (44..82); Pfam:PF04434.12:SWIM;
Pfam_type:Domain;HMM_aln_Length:39; HMM_Length:40;
EVALUE:7.7e-05; BITSCORE: 22.0"
/note="Pfam_scan:hit_2 (210..478); Pfam:PF00176.18:SNF2_N;
Pfam_type:Family;HMM_aln_Length:267; HMM_Length:299;
EVALUE:2.8e-44; BITSCORE: 151.0"
/note="Pfam_scan:hit_3 (548..626);
Pfam:PF00271.26:Helicase_C;
Pfam_type:Family;HMM_aln_Length:75; HMM_Length:78;
EVALUE:5.9e-18; BITSCORE: 64.5"
/note="GO_domain:GO:0043167"
BEGIN
1 MLREVQIDIR RQRAKAVKFQ IENLGKNRVF SDYRITNPES GGQYTVSVKG FEVGDNSCTC
61 PDFKANTLGT CKHIEAVLDH LKDELPPHLQ KKKAAVTRPE IFLHYGEQLQ LGAHIPPRHS
121 DKLAKLAHTY FDEKGLWSGR GKYTDLIRDV EAVPEEVTVM SDALEFVDRE IERAELLARE
181 QVLVKQLEAG TLDLNLLSVP LYDYQMRGAL FLACRGRSIL GDDMGLGKTA QTLAAVELLA
241 RERGIQRALV VAPASVKYQW ESEIRKFTSR PVQVIDGSPE ARLDQYAEPT FFRLVNYEQV
301 VRDREAINAW KPDVIVLDEA QRIKNWEAKT SKEVKKLKSR YAIVLTGTPL ENKLEELYSI
361 VQFVDERRFG PAFEFLYEHR VLDENGNLKG YRNLDKIREK LAPIFLRRTR GEVLTQLPAR
421 TDNTVFVELA AEQRTHYEEQ RTTLARLLQK NYLTDLDRKR ILACLVNLRT ICDSLFLFDR
481 QTRISPKLDE FAELVPELLS DPTPHPQKAE FQSEGSAPVP EKGVGGGSTD HKLVVFSQWE
541 TMAMEAAKVL DKLGVGYVLL HGGLPGKERK AVLERFQTDP ACKIFLSTDA GGTGLNLQTA
601 DTVVNLELPW NPAVLEQRIA RVHRMGQNRP VRVINFVTRG TIEEKVLRTV EAKQGLFTGL
661 FAGDADEIPF EAINTGGFLD TMRELVGDES GDKPLSVGTK KRELGTRKPG EGAALAPREP
721 SDRSGLAAPD SMWNGIAQII EGACAVVANP DAAKQMPSDV RERLETAIRA LASNLRPESA
781 N
//