LOCUS VTR90990.1 375 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana abc transporter substrate-binding protein
: Spermidine/putrescine ABC transporter substrate binding
protein OS=Rhizobium lupini HPC(L) GN=C241_09881 PE=4
SV=1: SBP_bac_8 protein.
ACCESSION LR593886-291
PROTEIN_ID VTR90990.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_67240"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|K5D2E6|K5D2E6_RHILU ;
ALN/Q_length_ratio=0.901 ;
DESCRIPTION=Spermidine/putrescine ABC transporter
substrate binding protein OS=Rhizobium lupini HPC(L)
GN=C241_09881 PE=4 SV=1 ; EVALUE=1e-13 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A098RRL8|A0A098RRL8_9RHIZ ;
ALN/Q_length_ratio=0.901 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Rhizobium sp. H41
GN=LW14_13015 PE=4 SV=1 ; EVALUE=2e-13 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A037Y0W1|A0A037Y0W1_RHIRD ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Rhizobium radiobacter
GN=BW45_15920 PE=4 SV=1 ; EVALUE=2e-13 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|U4PYE0|U4PYE0_9RHIZ ;
ALN/Q_length_ratio=0.901 ;
DESCRIPTION=Spermidine/putrescine-binding periplasmic
protein OS=Rhizobium sp. IRBG74 GN=BN877_II0330 PE=4 SV=1
; EVALUE=2e-13 ; Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A081CPR2|A0A081CPR2_9RHIZ ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=Putative ABC
transporter substrate-binding protein OS=Rhizobium rubi
NBRC 13261 GN=RRU01S_01_00870 PE=4 SV=1 ; EVALUE=3e-13 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A060PH71|A0A060PH71_9BURK ;
ALN/Q_length_ratio=0.795 ; DESCRIPTION=Extracellular
solute-binding protein OS=Burkholderia sp. RPE67
GN=BRPE67_CCDS12120 PE=4 SV=1 ; EVALUE=4e-13 ;
Q/S_length_ratio=1.084"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G8MJ38|G8MJ38_9BURK ;
ALN/Q_length_ratio=0.795 ; DESCRIPTION=Extracellular
solute-binding protein OS=Burkholderia sp. YI23
GN=BYI23_C000950 PE=4 SV=1 ; EVALUE=5e-13 ;
Q/S_length_ratio=1.084"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M8AKZ0|M8AKZ0_RHIRD ;
ALN/Q_length_ratio=0.840 ;
DESCRIPTION=Spermidine/putrescine ABC transporter
substrate binding protein OS=Agrobacterium tumefaciens
str. Cherry 2E-2-2 GN=H009_07641 PE=4 SV=1 ; EVALUE=6e-13
; Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F7UET2|F7UET2_RHIRD ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=ABC transporter,
substrate binding protein OS=Agrobacterium tumefaciens F2
GN=Agau_L101485 PE=4 SV=1 ; EVALUE=1e-12 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A024J232|A0A024J232_RHIRD ;
ALN/Q_length_ratio=0.840 ;
DESCRIPTION=Spermidine/putrescine ABC transporter,
substrate binding protein OS=Rhizobium radiobacter
GN=BN949_04853 PE=4 SV=1 ; EVALUE=1e-12 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A067U9Q2|A0A067U9Q2_RHIRD ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Agrobacterium tumefaciens GW4
GN=K538_07680 PE=4 SV=1 ; EVALUE=2e-12 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F5JHQ1|F5JHQ1_9RHIZ ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=ABC transporter,
substrate binding protein (Spermidine/putrescine)
OS=Agrobacterium sp. ATCC 31749 GN=AGRO_4704 PE=4 SV=1 ;
EVALUE=3e-12 ; Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A083ZJ80|A0A083ZJ80_RHIRD ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Rhizobium radiobacter
GN=EN41_25895 PE=4 SV=1 ; EVALUE=4e-12 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A9CGM0|A9CGM0_AGRT5 ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=ABC transporter,
substrate binding protein (Spermidine/putrescine)
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=Atu4421 PE=4 SV=1 ; EVALUE=4e-12 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A037ZB23|A0A037ZB23_CLOTT ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Clostridium tetanomorphum DSM
665 GN=CTM_09341 PE=4 SV=1 ; EVALUE=6e-12 ;
Q/S_length_ratio=1.065"
/note="Pfam_scan:hit_1 (59..340);
Pfam:PF13416.1:SBP_bac_8;
Pfam_type:Family;HMM_aln_Length:264; HMM_Length:281;
EVALUE:1.4e-23; BITSCORE: 84.0"
/note="GO_domain:GO:0005623"
/note="GO_domain:GO:0006810"
/note="GO_domain:GO:0003674"
BEGIN
1 MNSHDVNRRG FLKTVGAALG AGGLLGGCSA PTPRGSDLSG RTLTVFVYSG LDKIFEDLFA
61 KPFEAKTGAT VVLDPGWEDS IAKLKTSPKG QPAFDLVLTD ATQGYPAIKS GMFRQIDFNK
121 VPNHKALAPG ALDNWVAKER YGVTFHESAM TLAGNRKQTG RPLTGWGDLM RDDLRGKIAL
181 YEWFYMSLYT FACMKAAADK KPGSAHQMLT DDIGSVLDFA KRERDRVRFW WPTGPKMLQD
241 LLQGNFAAGN AHSVTMLQMP KDKIDTVGFT TPEADRAFVQ LMWVIPADTP NADLAEAAID
301 FLLTKDVQAA MAERGAGTSH VEAAREVAKE NAVWAQTYPS TDEQFRTMKY FPYEAYFKDW
361 DQIKKTWEQE ILRKS
//