LOCUS VTR90988.1 262 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana polyamine abc transporter permease
: ABC transporter permease OS=Pseudomonas poae RE*1-1-
14 GN=H045_18210 PE=3 SV=1: BPD_transp_1 protein.
ACCESSION LR593886-289
PROTEIN_ID VTR90988.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_67260"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L7HKP4|L7HKP4_PSEFL ;
ALN/Q_length_ratio=0.901 ; DESCRIPTION=Binding-protein
dependent transport system inner membrane protein
OS=Pseudomonas fluorescens BRIP34879 GN=A986_06831 PE=3
SV=1 ; EVALUE=2e-43 ; Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M4K3Z3|M4K3Z3_9PSED ;
ALN/Q_length_ratio=0.901 ; DESCRIPTION=ABC transporter
permease OS=Pseudomonas poae RE*1-1-14 GN=H045_18210 PE=3
SV=1 ; EVALUE=2e-43 ; Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|J1IKI4|J1IKI4_9PSED ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=Putative ABC
transporter membrane protein OS=Pseudomonas sp. Ag1
GN=A462_13610 PE=3 SV=1 ; EVALUE=3e-42 ;
Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|V7DZM3|V7DZM3_PSEFL ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=ABC-type
spermidine/putrescine transport system, permease component
II OS=Pseudomonas fluorescens BBc6R8 GN=MHB_003707 PE=3
SV=1 ; EVALUE=3e-42 ; Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|V6JCE7|V6JCE7_PSEPU ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=Binding--dependent
transport system inner membrane component family protein
OS=Pseudomonas putida S610 GN=EDP1_578 PE=3 SV=1 ;
EVALUE=6e-42 ; Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A089ZRF0|A0A089ZRF0_9PSED ;
ALN/Q_length_ratio=0.874 ; DESCRIPTION=Polyamine ABC
transporter permease OS=Pseudomonas rhizosphaerae
GN=LT40_18455 PE=4 SV=1 ; EVALUE=1e-41 ;
Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|R7X1U9|R7X1U9_9BURK ;
ALN/Q_length_ratio=0.908 ;
DESCRIPTION=Binding-protein-dependent transport system
inner membrane protein OS=Pandoraea sp. SD6-2
GN=C266_11420 PE=3 SV=1 ; EVALUE=1e-41 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W2DL85|W2DL85_9PSED ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=Putative ABC
transporter membrane protein OS=Pseudomonas sp. FH4
GN=H097_07110 PE=3 SV=1 ; EVALUE=4e-41 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|V9R604|V9R604_9PSED ;
ALN/Q_length_ratio=0.847 ; DESCRIPTION=Polyamine ABC
transporter permease OS=Pseudomonas sp. TKP GN=U771_28785
PE=3 SV=1 ; EVALUE=4e-41 ; Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A061CW91|A0A061CW91_PSEPS ;
ALN/Q_length_ratio=0.924 ;
DESCRIPTION=Binding-protein-dependent transport systems
inner membrane component OS=Pseudomonas pseudoalcaligenes
GN=PPSAL_3702 PE=3 SV=1 ; EVALUE=6e-41 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|W6R0T4|W6R0T4_PSEPS ;
ALN/Q_length_ratio=0.924 ;
DESCRIPTION=Binding-protein-dependent transport systems
inner membrane component OS=Pseudomonas pseudoalcaligenes
CECT 5344 GN=BN5_3759 PE=3 SV=1 ; EVALUE=6e-41 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|J2N8B0|J2N8B0_9PSED ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=ABC-type
spermidine/putrescine transport system, permease component
II OS=Pseudomonas sp. GM21 GN=PMI22_04861 PE=3 SV=1 ;
EVALUE=7e-41 ; Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A087FDB8|A0A087FDB8_9PSED ;
ALN/Q_length_ratio=0.924 ; DESCRIPTION=Polyamine ABC
transporter permease OS=Pseudomonas sp. 1-7 GN=JF55_06225
PE=3 SV=1 ; EVALUE=9e-41 ; Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|U1U4K5|U1U4K5_PSEME ;
ALN/Q_length_ratio=0.924 ; DESCRIPTION=Polyamine ABC
transporter permease OS=Pseudomonas mendocina EGD-AQ5
GN=O203_23775 PE=3 SV=1 ; EVALUE=9e-41 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|V8D9Q7|V8D9Q7_9PSED ;
ALN/Q_length_ratio=0.947 ; DESCRIPTION=Polyamine ABC
transporter permease OS=Pseudomonas chlororaphis subsp.
aurantiaca PB-St2 GN=U724_21020 PE=3 SV=1 ; EVALUE=1e-40 ;
Q/S_length_ratio=0.956"
/note="Pfam_scan:hit_1 (81..262);
Pfam:PF00528.17:BPD_transp_1;
Pfam_type:Family;HMM_aln_Length:179; HMM_Length:185;
EVALUE:2e-21; BITSCORE: 76.3"
/note="GO_domain:GO:0005575"
/note="GO_domain:GO:0006810"
BEGIN
1 MLNRVSSSIW LLGRVLGGFT LLALVAPFVC AVWMSFAPGE LLEPPTEEWS VRWYREFFGS
61 AKWTRALRTS AEVAVISVAG SLVGGLGLAV AVTRFHFCGR NLLSSAVLLP MFVPTVVLAM
121 GLLPLVMLAG LQGRAYSLAA AHSLVSLPVV FLLLRNALTG ADPDLERAAR GLGAGPWTAF
181 RRVTLPLIAP AVLAGAIIAF ILSVNEFTFA VFLGTPRART LPAALWPEAR DKDTPLLAAA
241 SCVTVLFTLT GMWITARILR RL
//