LOCUS VTR90894.1 411 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana ribosome small subunit-dependent gtpase
a : Putative ribosome biogenesis GTPase RsgA OS=uncultured
planctomycete GN=rsgA PE=3 SV=1: DUF258 protein.
ACCESSION LR593886-195
PROTEIN_ID VTR90894.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_68200"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SLX6|H5SLX6_9BACT ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=uncultured planctomycete GN=rsgA
PE=3 SV=1 ; EVALUE=1e-158 ; Q/S_length_ratio=1.084"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DA68|L0DA68_SINAD ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=rsgA PE=3 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2R982|D2R982_PIRSD ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=rsgA PE=3 SV=1 ;
EVALUE=1e-122 ; Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5SQE5|D5SQE5_PLAL2 ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=rsgA PE=3 SV=1
; EVALUE=1e-120 ; Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6C421|A6C421_9PLAN ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Planctomyces maris DSM 8797
GN=rsgA PE=3 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=1.070"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5T583|M5T583_9PLAN ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Rhodopirellula sp. SWK7 GN=rsgA
PE=3 SV=1 ; EVALUE=1e-118 ; Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5UMZ5|M5UMZ5_9PLAN ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Rhodopirellula sallentina SM41
GN=rsgA PE=3 SV=1 ; EVALUE=1e-117 ;
Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5SAT3|M5SAT3_9PLAN ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Rhodopirellula europaea SH398
GN=rsgA PE=3 SV=1 ; EVALUE=1e-112 ;
Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L7CIQ4|L7CIQ4_RHOBT ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Rhodopirellula baltica SWK14
GN=rsgA PE=3 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K5CE18|K5CE18_RHOBT ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Rhodopirellula baltica SH28
GN=rsgA PE=3 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E8QYX4|E8QYX4_ISOPI ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=rsgA PE=3 SV=1 ; EVALUE=1e-110
; Q/S_length_ratio=0.972"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F2AP47|F2AP47_RHOBT ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Rhodopirellula baltica WH47
GN=rsgA PE=3 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F0SFA5|F0SFA5_PLABD ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=rsgA PE=3 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M2B5H1|M2B5H1_9PLAN ;
ALN/Q_length_ratio=0.876 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Rhodopirellula europaea 6C
GN=rsgA PE=3 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=1.123"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5RZ54|M5RZ54_9PLAN ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=Putative ribosome
biogenesis GTPase RsgA OS=Rhodopirellula maiorica SM1
GN=rsgA PE=3 SV=1 ; EVALUE=1e-103 ;
Q/S_length_ratio=1.076"
/note="Pfam_scan:hit_1 (246..406); Pfam:PF03193.11:DUF258;
Pfam_type:Family;HMM_aln_Length:156; HMM_Length:161;
EVALUE:4.3e-51; BITSCORE: 172.2"
/note="GO_domain:GO:0003924"
/note="GO_domain:GO:0043167"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MSKKKKVRVE LRKNREKPPR ENDITRDYQE GDGRADDARS SERVRAKGNL SRYRTVVQDE
61 SADGSTMPAV NAETCIRGRV LRVHGLASVV ETDDGRVFRC AVRRLLKSLA TDERSVVTTG
121 DVVWIRLVGT GSRDQAAGAG EEQLPAELAT EPAEDSAPSL ESRTSTIAQE GVIERVEPRH
181 GVLTRASRRR EHVLVANVDQ LVIVMSLVEP NLKPHLIDRY LAAAQQGDLK PVLCLNKSDL
241 ADAVELQSLI GLYAQLGVPV FLCSARTGAG VDRLREQLRG RSTVFSGQSG VGKSSLLNAV
301 QPDLALAVKS VSEVNQKGRH TTTYSQLIKL DFGGWVVDTP GVRQLSLWQA RPEEMEGYFP
361 EFRPFVPLCG FPDCTHTHET SCAVKDAVAR RFITSRRYHS YLGLFNGTTE E
//