LOCUS VTR90886.1 302 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Uncultured bacterium genome assembly
Metasoil_fosmids_resub (Fragment) OS=uncultured bacterium
PE=4 SV=1: AP_endonuc_2 protein.
ACCESSION LR593886-187
PROTEIN_ID VTR90886.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_68280"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KH77|A0A090KH77_9BACT ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
(Fragment) OS=uncultured bacterium PE=4 SV=1 ;
EVALUE=1e-130 ; Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I0I8A8|I0I8A8_CALAS ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Uncharacterized
protein OS=Caldilinea aerophila (strain DSM 14535 / JCM
11387 / NBRC 104270 / STL-6-O1) GN=CLDAP_34560 PE=4 SV=1 ;
EVALUE=1e-124 ; Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L7CH14|L7CH14_RHOBT ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula baltica SWK14
GN=RBSWK_02805 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q7UGS2|Q7UGS2_RHOBA ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB5053 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=0.918"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F2AUD2|F2AUD2_RHOBT ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula baltica WH47
GN=RBWH47_00324 PE=4 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0DKP2|L0DKP2_SINAD ;
ALN/Q_length_ratio=1.007 ; DESCRIPTION=Sugar phosphate
isomerase/epimerase OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_5701 PE=4 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5D0Q2|K5D0Q2_RHOBT ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula baltica SH28
GN=RBSH_04584 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5S4V7|M5S4V7_9PLAN ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula europaea SH398
GN=RESH_02891 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2ALF5|M2ALF5_9PLAN ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula europaea 6C
GN=RE6C_01278 PE=4 SV=1 ; EVALUE=1e-120 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D7BDI1|D7BDI1_MEISD ;
ALN/Q_length_ratio=1.007 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Meiothermus silvanus (strain
ATCC 700542 / DSM 9946 / VI-R2) GN=Mesil_2962 PE=4 SV=1 ;
EVALUE=1e-119 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|G0J5R9|G0J5R9_CYCMS ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Cyclobacterium
marinum (strain ATCC 25205 / DSM 745) GN=Cycma_1616 PE=4
SV=1 ; EVALUE=1e-119 ; Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C6W556|C6W556_DYAFD ;
ALN/Q_length_ratio=1.010 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Dyadobacter fermentans
(strain ATCC 700827 / DSM 18053 / NS114) GN=Dfer_1167 PE=4
SV=1 ; EVALUE=1e-117 ; Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|S7V9K0|S7V9K0_9BACT ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Inosose isomerase
OS=Cyclobacterium qasimii M12-11B GN=ADICYQ_4910 PE=4 SV=1
; EVALUE=1e-116 ; Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D2QKA4|D2QKA4_SPILD ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Spirosoma linguale (strain
ATCC 33905 / DSM 74 / LMG 10896) GN=Slin_2917 PE=4 SV=1 ;
EVALUE=1e-115 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I2GHM5|I2GHM5_9BACT ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Fibrisoma limi BUZ 3
GN=BN8_02492 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=0.993"
/note="Pfam_scan:hit_1 (19..252);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:203; HMM_Length:213;
EVALUE:6.2e-36; BITSCORE: 123.6"
BEGIN
1 MQLGFVSAIL ADQSLEQVLA FAADEGFSCV ELMCWPPGRA DRRYAGVTHL DVTNFTDEAA
61 ASVQDLLRIH RVNISALGYY PNPLDPDPAH RAHVCDHLIN VIRAAAKLGV GVVNTFIGRD
121 PAGTVNANFD LVKQVWPRVL DEAREAGVRL GIEHCPMLFS ENEWPGGKNV AISPALWRRL
181 FDTFPDAPLG LNFDPSHLIW QFIDCGRAVR EFGSRIVHVH AKDERIDSAR LYDVGVLGLG
241 WHVPKLPGLG DVKWGEFFAA LTDVGYTGPV CIEVEDRAYE GSLAERQRAL RQSRKFLEQF
301 IG
//