LOCUS VTR90875.1 381 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana radical sam domain-containing protein
: Hypothetical conserved protein OS=uncultured planctomycete
GN=HGMM_F11G08C19 PE=4 SV=1: Radical_SAM protein.
ACCESSION LR593886-176
PROTEIN_ID VTR90875.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_68390"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R0I3|D2R0I3_PIRSD ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Radical SAM domain
protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
/ ICPB 4128) GN=Psta_0155 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A4A1E1|A4A1E1_9PLAN ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_04475 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8R5K3|E8R5K3_ISOPI ;
ALN/Q_length_ratio=0.966 ; DESCRIPTION=Radical SAM domain
protein OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_1165 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SRE0|D5SRE0_PLAL2 ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=Radical SAM domain
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_2811 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.948"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SLX4|H5SLX4_9BACT ;
ALN/Q_length_ratio=0.937 ; DESCRIPTION=Hypothetical
conserved protein OS=uncultured planctomycete
GN=HGMM_F11G08C19 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L0DLB2|L0DLB2_SINAD ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Menaquinone
biosynthesis protein, SCO4550 family OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_6079 PE=4 SV=1 ; EVALUE=1e-180 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6C9N4|A6C9N4_9PLAN ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_06827
PE=4 SV=1 ; EVALUE=1e-180 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5RXP9|M5RXP9_9PLAN ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula europaea SH398
GN=RESH_05507 PE=4 SV=1 ; EVALUE=1e-179 ;
Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5UFB1|M5UFB1_9PLAN ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula sallentina
SM41 GN=RSSM_03891 PE=4 SV=1 ; EVALUE=1e-179 ;
Q/S_length_ratio=0.982"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L7CMH4|L7CMH4_RHOBT ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula baltica SWK14
GN=RBSWK_00851 PE=4 SV=1 ; EVALUE=1e-179 ;
Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F2AYM7|F2AYM7_RHOBT ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Radical SAM domain
protein OS=Rhodopirellula baltica WH47 GN=RBWH47_01000
PE=4 SV=1 ; EVALUE=1e-179 ; Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K5DAB6|K5DAB6_RHOBT ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula baltica SH28
GN=RBSH_01146 PE=4 SV=1 ; EVALUE=1e-179 ;
Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q7UT24|Q7UT24_RHOBA ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB4160 PE=4 SV=1 ; EVALUE=1e-178 ;
Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F0SNT6|F0SNT6_PLABD ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Menaquinone
biosynthesis protein OS=Planctomyces brasiliensis (strain
ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM
1448) GN=Plabr_1360 PE=4 SV=1 ; EVALUE=1e-178 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M2ACM6|M2ACM6_9PLAN ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula europaea 6C
GN=RE6C_04482 PE=4 SV=1 ; EVALUE=1e-178 ;
Q/S_length_ratio=0.990"
/note="Pfam_scan:hit_1 (59..233);
Pfam:PF04055.16:Radical_SAM;
Pfam_type:Domain;HMM_aln_Length:162; HMM_Length:166;
EVALUE:2.2e-13; BITSCORE: 50.7"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0051186"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0016765"
BEGIN
1 MNTIDHILAK AVEGTRLTPD EGLALFACRD LHKLGRAAHA VTMRLHPEPY RTFNIDRNIN
61 YTNVCAAVCD FCAFYRKSAD SDAYVLSREE LYKKIEETIA LGGDQVLMQG GMHPSLKLEW
121 YEELLRDLKA RFPTVNLHAF SPPEIWHFHK INKLPLETVL GRLKDAGLGS LPGGGGEILV
181 DRVRKELTKG KALASEWLEV CRVWHKLGGK GTCTMMFGHI ETDAERIEHL TRLRDLQDET
241 GGFTAFICWT MQPGHKMADF PEMGAFEYLR TQAISRLYLD NIPNIQSSWV TQGGKIGQVA
301 LFFGANDMGS LMIEENVVAS AGTVHYLTLE EIKRSIREAG WEPRQRNVFY QLIDEKPVPH
361 SEPRPTGGSA QVPHTSLPVL N
//