LOCUS VTR90761.1 134 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-binding protein : RRM domain-containing
RNA-binding protein OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5259
PE=4 SV=1: RRM_1 protein.
ACCESSION LR593886-62
PROTEIN_ID VTR90761.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_69530"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DL85|L0DL85_SINAD ;
ALN/Q_length_ratio=0.619 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5259 PE=4 SV=1 ; EVALUE=7e-28 ;
Q/S_length_ratio=1.031"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B1Y6Y3|B1Y6Y3_LEPCP ;
ALN/Q_length_ratio=0.657 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Leptothrix cholodnii (strain ATCC
51168 / LMG 8142 / SP-6) GN=Lcho_0186 PE=4 SV=1 ;
EVALUE=1e-26 ; Q/S_length_ratio=0.854"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A059KKA3|A0A059KKA3_9BURK ;
ALN/Q_length_ratio=0.657 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Sphaerotilus natans subsp. natans
DSM 6575 GN=X805_25390 PE=4 SV=1 ; EVALUE=3e-25 ;
Q/S_length_ratio=0.870"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A1VNL4|A1VNL4_POLNA ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Polaromonas naphthalenivorans
(strain CJ2) GN=Pnap_1932 PE=4 SV=1 ; EVALUE=3e-25 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A0A0DP58|A0A0A0DP58_9BURK ;
ALN/Q_length_ratio=0.657 ; DESCRIPTION=RNA-binding protein
OS=Aquabacterium sp. NJ1 GN=JY96_11020 PE=4 SV=1 ;
EVALUE=4e-25 ; Q/S_length_ratio=0.838"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A068YHH1|A0A068YHH1_9BURK ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=RNA-binding protein
OS=Polaromonas sp. CG9_12 PE=4 SV=1 ; EVALUE=5e-25 ;
Q/S_length_ratio=0.924"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A1VWW4|A1VWW4_POLNA ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Polaromonas naphthalenivorans
(strain CJ2) GN=Pnap_4731 PE=4 SV=1 ; EVALUE=9e-25 ;
Q/S_length_ratio=0.893"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2R149|D2R149_PIRSD ;
ALN/Q_length_ratio=0.612 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_3879 PE=4 SV=1 ;
EVALUE=2e-24 ; Q/S_length_ratio=0.859"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A1VW19|A1VW19_POLNA ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Polaromonas naphthalenivorans
(strain CJ2) GN=Pnap_4579 PE=4 SV=1 ; EVALUE=3e-24 ;
Q/S_length_ratio=0.905"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A1VUR7|A1VUR7_POLNA ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Polaromonas naphthalenivorans
(strain CJ2) GN=Pnap_4105 PE=4 SV=1 ; EVALUE=3e-24 ;
Q/S_length_ratio=0.882"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A068YK74|A0A068YK74_9BURK ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=RNA-binding protein
OS=Polaromonas sp. CG9_12 PE=4 SV=1 ; EVALUE=4e-24 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A068YMP2|A0A068YMP2_9BURK ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=RNA-binding protein
OS=Polaromonas sp. CG9_12 PE=4 SV=1 ; EVALUE=4e-24 ;
Q/S_length_ratio=0.859"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A2SMG9|A2SMG9_METPP ;
ALN/Q_length_ratio=0.619 ; DESCRIPTION=RNA-binding region
RNP-1 OS=Methylibium petroleiphilum (strain PM1)
GN=Mpe_A3805 PE=4 SV=1 ; EVALUE=7e-24 ;
Q/S_length_ratio=0.827"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I0HYE0|I0HYE0_RUBGI ;
ALN/Q_length_ratio=0.619 ; DESCRIPTION=RNP-1 like
RNA-binding protein, Glycine-rich OS=Rubrivivax
gelatinosus (strain NBRC 100245 / IL144) GN=RGE_46940 PE=4
SV=1 ; EVALUE=9e-24 ; Q/S_length_ratio=0.832"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|H5WMN2|H5WMN2_9BURK ;
ALN/Q_length_ratio=0.619 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Burkholderiales
bacterium JOSHI_001 GN=BurJ1DRAFT_5009 PE=4 SV=1 ;
EVALUE=1e-23 ; Q/S_length_ratio=0.802"
/note="Pfam_scan:hit_1 (5..75); Pfam:PF00076.17:RRM_1;
Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:70;
EVALUE:2.9e-26; BITSCORE: 90.9"
/note="GO_domain:GO:0003674"
BEGIN
1 MATNIYVGNL PWSTTDEELS AMFQQFGAVT RAQVVMDRET GRSRGFGFVE MANENEAQAA
61 IAALNNQAIN GRPLTVNIAK PREGGGGGGG GRGGYGGGGG GGRRGGGGGY GGGGGGYGGG
121 YGGGGGGGYG GDRY
//