LOCUS VTR90728.1 509 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana cysteinyl-trna synthetase : Cysteine-
-tRNA ligase OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=cysS PE=
3 SV=1: tRNA-synt_1e: DALR_2 protein.
ACCESSION LR593886-29
PROTEIN_ID VTR90728.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_69860"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DL80|L0DL80_SINAD ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=cysS PE=3 SV=1 ;
EVALUE=1e-177 ; Q/S_length_ratio=1.043"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8QZA9|E8QZA9_ISOPI ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630
/ IS1B) GN=cysS PE=3 SV=1 ; EVALUE=1e-166 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SPC4|D5SPC4_PLAL2 ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=cysS PE=3 SV=1 ;
EVALUE=1e-162 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6C6Z0|A6C6Z0_9PLAN ;
ALN/Q_length_ratio=1.018 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Planctomyces maris DSM 8797 GN=cysS PE=3 SV=1 ;
EVALUE=1e-155 ; Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D2QZ58|D2QZ58_PIRSD ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
/ ICPB 4128) GN=cysS PE=3 SV=1 ; EVALUE=1e-149 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5U4F9|M5U4F9_9PLAN ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula sallentina SM41 GN=cysS PE=3 SV=1
; EVALUE=1e-144 ; Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A3ZYT8|A3ZYT8_9PLAN ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Blastopirellula marina DSM 3645 GN=cysS PE=3
SV=1 ; EVALUE=1e-143 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5SGN6|M5SGN6_9PLAN ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula europaea SH398 GN=cysS PE=3 SV=1
; EVALUE=1e-141 ; Q/S_length_ratio=0.850"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|K5DD17|K5DD17_RHOBT ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula baltica SH28 GN=cysS PE=3 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5TDB8|M5TDB8_9PLAN ;
ALN/Q_length_ratio=1.014 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula sp. SWK7 GN=cysS PE=3 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_9 ; ACCESSION=Q7US70 ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula baltica (strain SH1) GN=cysS PE=3
SV=2 ; EVALUE=1e-141 ; Q/S_length_ratio=0.948"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L7CNY2|L7CNY2_RHOBT ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula baltica SWK14 GN=cysS PE=3 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.848"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M2ACX1|M2ACX1_9PLAN ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula europaea 6C GN=cysS PE=3 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.850"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F2ATH5|F2ATH5_RHOBT ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula baltica WH47 GN=cysS PE=3 SV=1 ;
EVALUE=1e-140 ; Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5S441|M5S441_9PLAN ;
ALN/Q_length_ratio=0.998 ; DESCRIPTION=Cysteine--tRNA
ligase OS=Rhodopirellula maiorica SM1 GN=cysS PE=3 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=0.959"
/note="Pfam_scan:hit_1 (15..318);
Pfam:PF01406.14:tRNA-synt_1e;
Pfam_type:Family;HMM_aln_Length:292; HMM_Length:301;
EVALUE:1.7e-108; BITSCORE: 362.2"
/note="Pfam_scan:hit_2 (366..440); Pfam:PF09190.6:DALR_2;
Pfam_type:Domain;HMM_aln_Length:59; HMM_Length:63;
EVALUE:1.1e-09; BITSCORE: 38.4"
/note="GO_domain:GO:0006790"
/note="GO_domain:GO:0005737"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0006399"
/note="GO_domain:GO:0006520"
/note="GO_domain:GO:0016874"
/note="GO_domain:GO:0006412"
/note="Enzyme_Code:EC:6.1.1"
/note="Enzyme_Code:EC:6.1.1.16"
BEGIN
1 MALQVYSTLT RKKEPFHKKP GDTVTMYVCG PTVYKPSHIG HMVGPVIFDT VKRYLTYLGY
61 KVKWIVNITD VDDKLINRAK ELNTTVPELS AKMTEDYFAC LKSLNVTGID HFPKATDHIG
121 GMIEVIQALI KKDYAYEVDD GVYFDVAKDA DYGKLSNRDP EQMEAGARLE PNPKKRNPGD
181 FALWKSKPGE PKEVQFESPF KCGRGRPGWH IECTCMAIKE LGETLDIHGG GLDLQFPHHE
241 NELAQSESWT DKPFAHFWMH NGLLKMGSAK MAGSVGNVVN IADLLKKHTA ETVRFLLLST
301 HYRSPIEYSE ERLDEIARSL QGFYRFFERY ERYTGVNFYS IKAPETQEAF SKLYNRRTEG
361 GNWFESFCGA LDEDFNTGNA IGFLYQLLNE LNRHADREGY EEHPEKRKGQ QFVDFTEGGI
421 ALRTMGTILG LFWEPPAKQS LGEDSTLVSG LMQLLLDLRN NLRATAKEAA KDNPLKKPLF
481 DQTDLIRKRL GELGVTLEDR PGGTTWRVG
//