LOCUS VTR90703.1 823 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna gyrase subunit b : DNA gyrase subunit
B OS=Singulisphaera acidiphila (strain ATCC BAA-1392 /
DSM 18658 / VKM B-2454 / MOB10) GN=gyrB PE=3 SV=1: HATPase_c:
DNA_gyraseB: Toprim: DNA_gyraseB_C protein.
ACCESSION LR593886-4
PROTEIN_ID VTR90703.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_70110"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R8B1|D2R8B1_PIRSD ;
ALN/Q_length_ratio=1.007 ; DESCRIPTION=DNA gyrase subunit
B OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 /
ICPB 4128) GN=gyrB PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5SPS0|D5SPS0_PLAL2 ;
ALN/Q_length_ratio=0.994 ; DESCRIPTION=DNA topoisomerase
type IIA subunit B region 2 domain protein OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 /
290) GN=Plim_0450 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.999"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M2ABE7|M2ABE7_9PLAN ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=Protein containing
DNA topoisomerase, type IIA, subunit B or
OS=Rhodopirellula europaea 6C GN=RE6C_05264 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.947"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8R0A7|E8R0A7_ISOPI ;
ALN/Q_length_ratio=1.046 ; DESCRIPTION=DNA topoisomerase
type IIA subunit B region 2 domain protein OS=Isosphaera
pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1650
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B2KAM7|B2KAM7_ELUMP ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=DNA gyrase subunit
B OS=Elusimicrobium minutum (strain Pei191) GN=gyrB PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|R7LCM4|R7LCM4_9BACT ;
ALN/Q_length_ratio=1.001 ; DESCRIPTION=DNA gyrase subunit
B OS=Coraliomargarita sp. CAG:312 GN=gyrB PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D5EPI2|D5EPI2_CORAD ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=DNA gyrase subunit
B OS=Coraliomargarita akajimensis (strain DSM 45221 / IAM
15411 / JCM 23193 / KCTC 12865) GN=gyrB PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D6SP74|D6SP74_9DELT ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=DNA gyrase subunit
B OS=Desulfonatronospira thiodismutans ASO3-1 GN=gyrB PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5U3S9|M5U3S9_9PLAN ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=DNA gyrase, B
subunit OS=Rhodopirellula sallentina SM41 GN=RSSM_02442
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.950"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q1PVC2|Q1PVC2_9BACT ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA gyrase subunit
B OS=Candidatus Kuenenia stuttgartiensis GN=gyrB PE=3 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F0SMU8|F0SMU8_PLABD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=DNA gyrase subunit
B OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM
5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_2350
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5REF9|M5REF9_9PLAN ;
ALN/Q_length_ratio=0.999 ; DESCRIPTION=DNA gyrase subunit
B OS=Rhodopirellula maiorica SM1 GN=RMSM_05602 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.930"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5RY41|M5RY41_9PLAN ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=DNA gyrase subunit
B OS=Rhodopirellula europaea SH398 GN=RESH_05220 PE=3 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=0.947"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6C2P9|A6C2P9_9PLAN ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=DNA gyrase subunit
B OS=Planctomyces maris DSM 8797 GN=PM8797T_09319 PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D7G5|L0D7G5_SINAD ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=DNA gyrase subunit
B OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=gyrB PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=0.967"
/note="Pfam_scan:hit_1 (36..181);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:106; HMM_Length:111;
EVALUE:1.7e-13; BITSCORE: 50.2"
/note="Pfam_scan:hit_2 (229..408);
Pfam:PF00204.20:DNA_gyraseB;
Pfam_type:Domain;HMM_aln_Length:172; HMM_Length:173;
EVALUE:6.4e-48; BITSCORE: 162.2"
/note="Pfam_scan:hit_3 (436..548); Pfam:PF01751.17:Toprim;
Pfam_type:Family;HMM_aln_Length:98; HMM_Length:100;
EVALUE:3.7e-23; BITSCORE: 81.4"
/note="Pfam_scan:hit_4 (745..809);
Pfam:PF00986.16:DNA_gyraseB_C;
Pfam_type:Family;HMM_aln_Length:61; HMM_Length:65;
EVALUE:5.6e-27; BITSCORE: 93.2"
/note="GO_domain:GO:0016887"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0051276"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.3"
/note="Enzyme_Code:EC:5.99.1"
/note="Enzyme_Code:EC:5.99.1.3"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MSTETPPAGE YTEAHMKSLK DAAHIRQNPG MYVGNTQSSG LHHLVYEIVY NSVDEWLAGH
61 GTHIRVTIHD NGAITVADDG RGIPVGIKKD TGKSALEEAL TVAGNSGKFD NAAYRVSLGL
121 HGMGAKAMNA LSEWCEVEVR RDNRVHKMEF ERGYATSKLQ DLGPAPAGQR GTTITFRPDP
181 LPEFFGTLQF DYETLEERFR EIAYLCKGLA ITLTDERTSK SVHFQFEGGI AEYVVWLNQG
241 ETLEHPPIYM QREVEHTTPE TSGMGLKVAV EVAIQYTGGE DERVRCYTNN AYNPVGGTHL
301 SGFRGGLTKA INAYGKKEGH FKPELEVRGD DFRAGLTAIV SISHPDPLFE SQTKIKLNNP
361 EVEGIVGSIV YECLSEYLEK NPKDAKRICD KVALTAELRL AAKKARDALK NRKNALSGGL
421 PGKLYDCTSR DHLKNELFLV EGDSAGGSAE SGRDRHYQAI LPLKGKVLNV EKAKFEKLLE
481 NNEIAALIGA VGIDIDNVED VSKVRYGKII ILTDADVDGQ HIRTLLLTFF FRQMRKLIEA
541 GHVFVARPPL FKVTQKKETR FVQTREEMVI ELTNRGLKAT ALQVTKPDQP ARTVMSDDLT
601 KLLPALTEAE TAVVGLERRG RTLDELLPRL VDGVFPVYHV YERAKNKEHW FRTSEDVTAF
661 KATLTEQLQR EPVIEEDYTL DEWHDLKALN RALAKMKSTG LDASDLVPLQ RVAGREPPVR
721 YTLEHDGHTK NLVSMRELVA EIRRLGEKGM AVTRFKGLGE MDPEELWETT LNPGHRTLLQ
781 VTLNDAFKAE EMFRTLMGKE VQDRRTFIFN NTLKSVEDID YGA
//