LOCUS VTR90701.1 375 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna polymerase iii subunit beta : DNA
polymerase III subunit beta OS=Rhodopirellula baltica
SWK14 GN=RBSWK_02256 PE=4 SV=1: DNA_pol3_beta: DNA_pol3_beta_2:
DNA_pol3_beta_3 protein.
ACCESSION LR593886-2
PROTEIN_ID VTR90701.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_70130"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M2AB87|M2AB87_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula europaea 6C GN=RE6C_05368
PE=4 SV=1 ; EVALUE=2e-73 ; Q/S_length_ratio=0.880"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5S637|M5S637_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula europaea SH398
GN=RESH_02443 PE=4 SV=1 ; EVALUE=2e-73 ;
Q/S_length_ratio=0.880"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L7CJV0|L7CJV0_RHOBT ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula baltica SWK14
GN=RBSWK_02256 PE=4 SV=1 ; EVALUE=2e-73 ;
Q/S_length_ratio=0.880"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F2ANE6|F2ANE6_RHOBT ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula baltica WH47
GN=RBWH47_05194 PE=4 SV=1 ; EVALUE=3e-73 ;
Q/S_length_ratio=0.852"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q7UKK1|Q7UKK1_RHOBA ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula baltica (strain SH1)
GN=dnaN PE=4 SV=1 ; EVALUE=4e-73 ; Q/S_length_ratio=0.845"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K5E6D8|K5E6D8_RHOBT ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula baltica SH28 GN=RBSH_03408
PE=4 SV=1 ; EVALUE=5e-73 ; Q/S_length_ratio=0.852"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F0SMU6|F0SMU6_PLABD ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Planctomyces brasiliensis (strain ATCC
49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_2348 PE=4 SV=1 ; EVALUE=4e-71 ;
Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5RHQ2|M5RHQ2_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula maiorica SM1 GN=RMSM_04249
PE=4 SV=1 ; EVALUE=4e-71 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5T156|M5T156_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula sp. SWK7 GN=RRSWK_04632
PE=4 SV=1 ; EVALUE=6e-71 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5UBR2|M5UBR2_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Rhodopirellula sallentina SM41
GN=RSSM_03320 PE=4 SV=1 ; EVALUE=8e-70 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A3ZRF0|A3ZRF0_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Blastopirellula marina DSM 3645
GN=DSM3645_11901 PE=4 SV=1 ; EVALUE=4e-69 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L0D6W7|L0D6W7_SINAD ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0120
PE=4 SV=1 ; EVALUE=9e-69 ; Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A6C2Q1|A6C2Q1_9PLAN ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Planctomyces maris DSM 8797
GN=PM8797T_09329 PE=4 SV=1 ; EVALUE=6e-67 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D2R8A9|D2R8A9_PIRSD ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=Psta_1042 PE=4 SV=1 ; EVALUE=5e-63 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E8R4C3|E8R4C3_ISOPI ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=DNA polymerase III
subunit beta OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_2145 PE=4 SV=1 ; EVALUE=6e-61 ;
Q/S_length_ratio=0.992"
/note="Pfam_scan:hit_1 (1..119);
Pfam:PF00712.14:DNA_pol3_beta;
Pfam_type:Domain;HMM_aln_Length:118; HMM_Length:120;
EVALUE:1.7e-18; BITSCORE: 66.6"
/note="Pfam_scan:hit_2 (129..249);
Pfam:PF02767.11:DNA_pol3_beta_2;
Pfam_type:Domain;HMM_aln_Length:113; HMM_Length:116;
EVALUE:2.3e-14; BITSCORE: 53.4"
/note="Pfam_scan:hit_3 (255..374);
Pfam:PF02768.10:DNA_pol3_beta_3;
Pfam_type:Domain;HMM_aln_Length:113; HMM_Length:121;
EVALUE:2.4e-10; BITSCORE: 40.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0005622"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:2.7.7.7"
BEGIN
1 MKITCQRDSL LTACQLVKAA VAARTTKPVL SNIKASAQDD TLTLVAYDME VGIRYELPGI
61 VVARAGSCIL PITELEKILR ESGDPDISLD AGSEAILVKT TGGRFEMPSL DVNEFPDIPS
121 FDDGGHYHEI TAGTLRTMIR RTAFSADKKD TSGRFSLTGV LWEAEEKGAH LVATDTKRLA
181 VCHGPASVYG VKDGVKTLHL VPLKAIALRE RNRAGDQELI RIGLRANAAL FQTERAMIYP
241 SLVQGKFPPY REIISKTQKD STQKISLPVD SFLSRVRQAA IMTDDESMRV DMTFDAGAVT
301 MKARGAKTGA SEVTLELPEY DGPKTEIAFD PSYLVEFLRS LDGEPTVLLE VSTGLRPALF
361 TCGDQYSYLV MPLTG
//