LOCUS RID72638.1 837 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-4844
PROTEIN_ID RID72638.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C04522"
/db_xref="Phytozome:Brara.C04522"
intron_pos 256:0 (1/12)
intron_pos 333:2 (2/12)
intron_pos 387:0 (3/12)
intron_pos 469:0 (4/12)
intron_pos 514:2 (5/12)
intron_pos 624:0 (6/12)
intron_pos 678:0 (7/12)
intron_pos 702:0 (8/12)
intron_pos 735:2 (9/12)
intron_pos 759:0 (10/12)
intron_pos 778:0 (11/12)
intron_pos 785:0 (12/12)
BEGIN
1 MRKKMCTVLV LLLSLLSVLP LPSESAVASV DLGSEWVKVA VVNIKRGQSP ISVAINEMSK
61 RKSPSLVAFH SGDRLLGEEA AGITARYPNK VYSQLRDMVG KPFKHVKDFI DSVYLPFDIV
121 EDSRGAVGVK IDDGTTVYSV EELLAMILGY GSDLAEFHAK IPVKDMVVSV PPYFGQAERR
181 GLIQASQLAG VNVLSLVHEH SGAALQYGID KDFANASRHV IFYDMGSSST YAALVYYSAY
241 NEKEFGKTVS VNQFQVKDVR WDSGLGGQSM EMRLVEYFAD EFNKQLGNGV DVRKFPKAMA
301 KLKKQVKRTK EILSANTGAP ISVESLHDDR DFRSTISREK FEELCKDLWE RSLTPLKDIL
361 KHSGLKMDDI YAVELIGGAT RVPKLQSTIQ EFIGKQDLDK HLDADEAIVL GSALHAANLS
421 DGIKLKRRLG IVDGSPYGFL VELEGPNVKK DESTKQQLVP RMKKLPSKMF RTFVLDKDFD
481 VSLAYESEDI LPPGITSPVF AQYSVSGLTD ATEKYSSRNL SAPIKANLHF SLSRSGVLSL
541 DRGDAVIEIT EWVEVPKKNV TIESNTTSTT GNASTGAASD ENLQENKEEL QADAGNSTAE
601 EPAVVDLGTE KKLKKRTFRI PLKVVEKTVG PGAPFTKESL AEAKTKLEAL DKKDKERRRT
661 AELKNNLESY IYATKEKLET PEFEKISTQE ERKAFVEKLD EVQDWLYMDG EDANATEFQE
721 RLDSLKAIDS PISLRSDELT ARPVAVEYAQ KYLTEVKEII KEWETNKTWL PKEKINEVSK
781 EAEKVTKVNR IPKPKPKIEK PTKKENATEE KSKGSEDSTN STESEAAAKE EEGHDEL
//