LOCUS RID70923.1 997 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-3129
PROTEIN_ID RID70923.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C02898"
/db_xref="Phytozome:Brara.C02898"
intron_pos 901:2 (1/1)
BEGIN
1 MSNIKLGVEV ISAHGLFNAD KQNSCSPFVE LKFDNQIFRT TTKPNDPNPV WHESFYFAVS
61 DPSFLSTLTL EAHVYSYQDG TDAKPFLGKV RVNGTSFVPH SEAAPFNYPL EKRSVFSRAR
121 GELGLRVFIT EDPSITPSLP TPVQESPRSY IPSPRQEPVK SIITAAANMV AADKPKARTL
181 YNVTPSVNQQ QQPTTTNYGM QEMRAAASMP PRVVQYNGPG PSSDFTVKET SPFLGGGRII
241 GGRIVRGTQR PVGTYDLVEE MRFLFVRVVK ARDLPDRDLT GSLDPYVEVK IGNFKGVTRH
301 LDKNSDPEWN QVFAFAKENL QSNVLEIVVK DKDLVLDDYV GTVRFDLHEV RSRVPPDSPL
361 APEWYRLENK RGEKKRAEIM LAVWEGTQAD EAFGDAVFSD SLTSSDSSDI ISANLRSKVY
421 HSPRLWYLRV KIIEAQDVII VSDKSRLPEA FVRIQVGNQM LKTKVAQRSF HPRWDNEFMF
481 VVAEPFEEHL VLSVEDHSAA NRDEPVGKAV IPLSAIERRN DDRTFRSRWF HLEDSISDAM
541 DEDKAKRVKF ATRLHVAAVL EGGYHVFDES TYYSSDLRPT ARQLWKQAIG VLELGILNAN
601 GLHPVKNRDG KGTSDTYVVA KYGHKWVRSR TVINSLNPKY NEQYTWEVLD PATVLTICVF
661 DNGHFSSGNG RDQTIGKVRI RLSTLQTGRV YTNAYPLLVL TPSGLKKRGE LHLAVRFTCT
721 SVSNTLMKYT KPLLPKMHYT QPLSVNLQEI LRVQALNIIV ARLGRSEPPL RREVVEYMTD
781 AKTHLFSMRR SKANFFRFTA VFSGVMSVWK WMGEVCSWRT PVTTGLVHVL YTMLVMFPEM
841 ILPTVFLYMA VIGLWNYRIR PRFPPHMDTK LSYAESVNAD ELDEEFDIFP TMKAPDIVKM
901 RYDRLRIVAG KIQTVVGDIA AQGERVQALL SWRDPRATAI FVTFCFIVAM VLYITPFKLF
961 ALLSGYYFMR HPKLRHRIPS APLNFFRRLP AMTDSML
//