LOCUS RID70825.1 1254 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-3031
PROTEIN_ID RID70825.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C02807"
/db_xref="Phytozome:Brara.C02807"
intron_pos 45:0 (1/26)
intron_pos 122:1 (2/26)
intron_pos 152:0 (3/26)
intron_pos 190:0 (4/26)
intron_pos 239:0 (5/26)
intron_pos 456:2 (6/26)
intron_pos 498:1 (7/26)
intron_pos 529:0 (8/26)
intron_pos 603:1 (9/26)
intron_pos 625:2 (10/26)
intron_pos 675:1 (11/26)
intron_pos 699:0 (12/26)
intron_pos 757:0 (13/26)
intron_pos 781:0 (14/26)
intron_pos 815:0 (15/26)
intron_pos 845:0 (16/26)
intron_pos 870:1 (17/26)
intron_pos 902:2 (18/26)
intron_pos 926:0 (19/26)
intron_pos 986:0 (20/26)
intron_pos 1027:0 (21/26)
intron_pos 1055:0 (22/26)
intron_pos 1116:2 (23/26)
intron_pos 1163:0 (24/26)
intron_pos 1183:0 (25/26)
intron_pos 1218:0 (26/26)
BEGIN
1 MVETRRSSSA SKRFCSSSSS PEPSSSSPRP TKRSKVKIDA AIESAAAAEP AGSSSASEVP
61 VENQGPVSDP GSESGEPELG SSDPQGVDAE KPVLTDVPVM EISPEADANP EADVLATPAV
121 AGEVVADGEK SKAGKKRAKA PWAKLLSQYS QNPHRIMRGP VFTVGRRGCD LSIKDQSMPS
181 TLCELKQSDH GGPSVATLEI TGNGVVVQVN GKCYQKSTCV HLRGGDEVIF TNFGRHAYIF
241 QPLKDENLAA APDRASSVSV CEARGAPLKG VHVETRAGDS SAADGASILA SLSKYRNFHL
301 LPPIAKSAKK QQNQEAPVVP SSCNDCVSDT EMNDADSNND HADIASVEKT ADANENLNAD
361 GSGLDPFQEA ADGNAPGSGY EIRPILRLLG EPSSVDIRGI SKLLDERREV RELLKEYDLS
421 STISTRRQAF NDSLREGVLS GQDIDVSLED FPYFLSATTK DVLIASMYVH MEGGSKFAKY
481 ASDLSTTCPR ILLSGPAGSE IYQEMLAKAL AKRFGAKLMI VDSLLLPGGS PAKEAESSKD
541 GSRRERLSML AKRAVQAAQA LQHKKPTSSV DADITGGSTL SSQALPKQEV STATSKSYIF
601 KAGDRVKYVG PSSSAISSLQ GPPLRGPSIG FQGKVLLAFE DNCSSKVGIR FDRPVPDGND
661 LGGLCEEDHG FFCAATSLRL DGSSSDDADK LAVNEVFEVA LSESEGGSLI LFLKDIEKSL
721 VGNSDVYATL KSKFENLPEN IVVMASQTQL DSRKEKSHPG GFLFTKFGGN QTALLDLAFP
781 DNFSKLHDRS KETPKSMKQI TRLFPNKVAI QLPQDEALLP DWKEKLDRDT ELLKVQANIT
841 SILAVLTKNR LDCPDLGTLC IKDQTLPSES VEKVVGWALS HHLMNCAEPI VKDNKLVISA
901 ESITYGLQML HGVQDENKSL KKSLKDVVTE NEFEKKLLSD VIPPSDIGVS FDDIGALENV
961 KDTLKELVML PLQRPELFDK GQLTKPTKGI LLFGPPGTGK TMLAKAVATE AGANFINISM
1021 SSITSKWFGE GEKYVKAVFS LASKIAPSVI FVDEVDSMLG RRENPGEHEA MRKMKNEFMV
1081 NWDGLRTKDR ERVLVLAATN RPFDLDEAVI RRLPRRLMVN LPDATNRSKI LSVILSKEEI
1141 APDVDLEAIA NMTDGYSGSD LKNLCVTAAH LPIREILEKE KKEKTAAEAE NRPTPPLYSC
1201 TDIRSLTMAD FKAAHEQVCA SVSTDSSNMN ELQQWNELYG EGGSRKKTSL SYFM
//