LOCUS RID70567.1 1028 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-2773
PROTEIN_ID RID70567.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C02577"
/db_xref="Phytozome:Brara.C02577"
intron_pos 933:1 (1/1)
BEGIN
1 MACKDKSRGD DLQFLLIIFT ILSCSLTASA TVSEANALLK WKSTFTNQTS SSKLSSWVNP
61 NTSFCSSWYG VSCLRNSIIR LNLTNTDIEG TFQDFPFSAL PNLTYVDLSM NRFSGTIPPQ
121 FGDFSKLIYF DLSINQLVGE IPPELGKLSN LETLHLVENK LNGSIPSEIG RLTKLHEIAL
181 YDNLLTGPIP SSLGNLTNLA NLYLFINSLS GPIPPEIGNL SSLAELCLDR NKLTGQIPSS
241 FAKLKNVTLL NMFENNLTGE IPPEIGDMSA LDTLSLHTNN LTGSIPSTLG NLKNLAILHL
301 YLNKLTGSIP EELGDMETMI DLEISENKLS GPVPGSFGKL TKLEWLFLRD NHLSGPIPPG
361 IANSSVLTVL QLDTNNFTGV LPDTICRSGK LENLTLDDNL LSGPIPKSLT NCKSLIRARF
421 KGNSFSGDIS ESFGEYPNLN FIDLSNNKFH GQISPKWEKS RKLVAFIATD NNITGPIPPE
481 IWNMTQLNQL DLSSNNISGE LPETINKLTR VSKLQLNGNQ LSGRIPSGIR SLANLEYLDL
541 SSNRFTFQIP ATLDSLPRLY YMNLSRNDLE QNIPMGLTKL SQLQTLDLSH NKLDGEIPSQ
601 FSSLQNLEKL YLQHNNLSGP IPSSFREMKS LTHVDVSHNN LSGPIPDNAA FENARPDALE
661 GNRDLCGSNA TQGLKPCEIT PSGKKKSNKD NNLLIYILVP IIGAIVILSV CAGIFVCFRK
721 RKPQIEEEAD TESGETLSIF SFDGKVKYQE IIKATGEFDP KHLIGTGGYG KVYKAKLPAI
781 TMAVKKLNET TDEEISKPTV RNEFLNEIRA LTEIRHRNVV KLFGFCSNRR NTFLVYEYME
841 RGSLRKVLGN DEEAKQLDWR RRINVVKGVA HALSYLHHDR SPPIVHRDIS SGNVLIDDDY
901 EAKISDFGTA KLLKVDSSNW SAVAGTYGYV APELAYAMKV TEKCDVFSFG VLTLEVIKGE
961 HPGDLVSTIS STPLDRTMSL KGISDRRLPE PTPEIKHEIL EIMKVALLCL HSDPNSRPTM
1021 LSISTAFA
//