LOCUS RID70504.1 1092 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-2710
PROTEIN_ID RID70504.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C02518"
/db_xref="Phytozome:Brara.C02518"
intron_pos 36:0 (1/13)
intron_pos 73:2 (2/13)
intron_pos 106:0 (3/13)
intron_pos 147:2 (4/13)
intron_pos 305:0 (5/13)
intron_pos 367:0 (6/13)
intron_pos 465:0 (7/13)
intron_pos 516:0 (8/13)
intron_pos 567:2 (9/13)
intron_pos 603:0 (10/13)
intron_pos 907:0 (11/13)
intron_pos 934:1 (12/13)
intron_pos 1029:1 (13/13)
BEGIN
1 MVKVRMNTAD VAAEVKCLKR LIGMRCSNVY DISPKTYMFK LLNSSGITES GESEKVLLLM
61 ESGVRLHTTA YVRDKSNTPS GFTLKLRKHI RTRRLEDVRQ LGYDRIIVFQ FGLGANAHYV
121 ILELYAQGNI ILTDSEYMIM TLLRSHRDDN KGFAIMSRHR YPIEICRLFE RTTASKLQES
181 LTAFSLKDHE AKDSESKEQN GGKKGGKSNE AKQFTLKNIL GDALGYGPQL SEHIILDAGL
241 VPSTKLSEEK KLDDNEIQLL VQAVIVFEDW LEDIIYGQKV PEGYILMQKQ LLVNDTSSQG
301 GVTKMYDEFC PILLNQFKSR VYEKFETFDA ALDEFYSKIE SQRSEFQQKA KEDSASQKLN
361 KIRQDQENRV QILKKEVDRC VNMAELIEYN LEDVDAAILA VRVALAKGMG WDDLARMVKE
421 EKKLGNPVAG VIDKLNLEKN CMTLLLCNNL DEMDDDEKTL PVEKVEVDLS LSAHGNARRW
481 YEMKKKQETK QEKTVSAHEK AFKAAEKKTR HQLSQEKVVA TISHMRKIHW FEKFNWFISS
541 ENYLVISGRD AQQNEMIVKR YMSKGDLYVH AELHGASSTV IKNHKPEQSV PPLTLNQAGC
601 FTVCHSQAWD SKIVTSAWWV YPHQVSKTAP TGEYLTVGSF MIRGKKNFLP PHPLIMGFGL
661 LFRLDESSLG AHLNERRVRG EEEGMNDVGM ETHAPDEHSD AESENEAENE EVSAAGEKNL
721 QESNTALSQD TSSLDMNSSG IDGESVAAAT SQLEDLLDRT LGLGTATVAG KNPTVETSKD
781 ESEEQEKKSV VRDKPYISKA QRRKLKMGES GNTAADDNTG EEKPERKEKS VSSGNTAADG
841 NTEKEKQQSK AKNASSSSRQ ANKTILENKP AGEKVSRGQR GKLKKMKEKY ADQDEEERKI
901 RMALLASSGK PQKNDVEAQS TKPAVTEEKK PSEETEDAVK ICYRCKKVGH LARDCHGKEM
961 DKVVMEEDDI HELGEEEKEK LIDVDYLTGN PLPTDVILYA VPVCGPYNAL QSYKYRVKAI
1021 PGSMKKGKAA KTAMNLFTHM SEASVREKEL MKACTDPELM AALVGNVKIT AAGLTQLKQK
1081 QKKGKKSGKH HG
//