LOCUS RID68613.1 810 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-818
PROTEIN_ID RID68613.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C00760"
/db_xref="Phytozome:Brara.C00760"
intron_pos 79:0 (1/18)
intron_pos 118:2 (2/18)
intron_pos 166:0 (3/18)
intron_pos 272:2 (4/18)
intron_pos 300:0 (5/18)
intron_pos 388:1 (6/18)
intron_pos 402:2 (7/18)
intron_pos 435:2 (8/18)
intron_pos 461:2 (9/18)
intron_pos 490:0 (10/18)
intron_pos 509:2 (11/18)
intron_pos 533:0 (12/18)
intron_pos 563:2 (13/18)
intron_pos 584:2 (14/18)
intron_pos 607:0 (15/18)
intron_pos 685:0 (16/18)
intron_pos 724:0 (17/18)
intron_pos 775:0 (18/18)
BEGIN
1 MADGEIQILR GYELRLLRCT VSSPPSDSPP ETHESQSETH PHDSLINSLL SLIESGDYLG
61 ALGSDASRLI LGDTELDLVE SFVANGSSGE IDKARRAVMV MCIAISAAFW FARCNLTGPT
121 DGSTKWSLPF KASEKSKELV EWENWAKIQL MSAGSDLLGK FSNLQHLVFA RMLLLKLKDL
181 YATEIFELRS VSWWIVRVLL IHQRVLHERS SSLFDMLQVF MAEALDHFGA LEKVESYWDD
241 KLLEGEVSSI TSTIHLEAFV LQYIYGRVDP CRLQLESAKA ASKLELSVSG AFGFRTIHQV
301 EPKAQMVLVA NTSSSNGDVR LASEKADVGS YYEAWGGEAP EVYMTPKLVN DEGETGKDSV
361 TLKPVEQAMV LAQCILIEKG SRNDEMQRWD MAPYIEAIDS QKEYGELLVS CGLVGEAITI
421 FESLELWDNL IHCYCFLGKK SAAVDLINAQ LLERPNDPRL WCSLGDVTVN DSCYEKALEV
481 SNDKSVRAKR ALARSAYNRG DFEKSQMLWE AAMALNSLYP DGWFALGAAA LKARDVQKAI
541 DAFTFAVQLD PDNGEAWNNI ACLHMIKKKS RESFVAFKEA LKFKRDSWQM WENFSHVAMD
601 VGNIDQTFEA IQQILRMSKN KRIDFVLLDR IMTELENRKS ACKSSSSSVE TDASSDESAE
661 TKPCAATPDE TQRHLELLGK IIQQIVRTES TSEIWGLYAR WSRIKGDLMV CSEALLKQVR
721 SYQGSEVWKD KERFKLFAKA SLELCRVYME ISESTGSRRE LFSAEMHLKN TIKQAIVSFS
781 ESEELKELEN CLEEVRDVMQ KSEETTNTKT
//