LOCUS RID68551.1 1049 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-757
PROTEIN_ID RID68551.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C00699"
/db_xref="Phytozome:Brara.C00699"
intron_pos 973:1 (1/2)
intron_pos 997:2 (2/2)
BEGIN
1 MSERRAKRLK TSRGEDDFLP GNIIEIELHN FMTFNHLVCK PGSRLNLVIG PNGSGKSSLV
61 CAIALCLGGE PQLLGRATSV GAYVKRGEDS GYVKITLRGK TSEEKFTIFR KIDTRNKSEW
121 MFNGNSVSKR EVVEVIQKFN IQVNNLTQFL PQDRVCEFAK LTPVQLLEET EKAVGDPQLP
181 VHHRDLVEKS RELKQLERAV EKNGETLTQL KALVDEQEKD VERVKQRELL LTKVDSMKKK
241 LPWLRYDKKK SEYQGAKKKL KEAEKKLDEA ARSLSNVKEP VEKQKKERGE MESKCKKVKK
301 ALETNGYKRS DLLEKENEAE ARVVATYKEL EELKKQEEHR QERILKATED LAAAEQELQN
361 LPVYEQPVAK LEELKSQVTE LHHNINRKKN QKADNETLLS QKRHTLRQCV DKLKEMENAN
421 NKLLNALHRS GADRIYEAYQ WVQQNRHDFK REVYGPVLLE VNVPNRENAC YLEGHISYYI
481 WKSFITQDPE DRDLLVRNLK RFDVPVLNYV RDSGNHSAPF HISDHMRSLG LHSRLDQIFD
541 APSAVKEVLT SQFSLDDSYI GSKITDQRAE EVSKLGVTDF WTPDNHYRWS SSRYGGHSSA
601 SVDSVHPSRL LLCGMDVGEL EKLRSRKEEL EDSISSIEET RKTLQTEQRL LEEEAAKLHK
661 EREEIINVSH MEKKKRRELE SRYQQRKKKL ESLEQEEDMD ASVANLIEQA SKANADRYAY
721 AINLKKLLVE AAANKWSYAE KHMALIELER KIRDSEINIK QYEKTANQAS LSVEYCKKEV
781 EEKQIQLAAA KRDAEAIAII TPQLKKEFME MPTTIEELEA AIQDNFTQAN SILFVNQNIL
841 QEYEHRQSQI ETITTKLEAD KRDLSRCLKE IESLKEKWLP TLRRLVAQIN ETFSHNFQEM
901 AVAGEVSLDE RDTDFDQYGI HIKVKFRESG QLQVLSSHHQ SGGERSVSTI LYLVSLQDLT
961 NCPFRVVDEI NQGMDPINER KMFQQLVRAA SQPNTPQCFL LTPKLLPELE YSEACSILNI
1021 MNGPWIEQPS QVWSFGDSWG NLMRRAEAS
//