LOCUS RID68174.1 835 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-379
PROTEIN_ID RID68174.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C00350"
/db_xref="Phytozome:Brara.C00350"
intron_pos 10:1 (1/17)
intron_pos 54:0 (2/17)
intron_pos 93:1 (3/17)
intron_pos 169:0 (4/17)
intron_pos 203:1 (5/17)
intron_pos 227:0 (6/17)
intron_pos 252:0 (7/17)
intron_pos 300:0 (8/17)
intron_pos 412:1 (9/17)
intron_pos 583:1 (10/17)
intron_pos 603:1 (11/17)
intron_pos 645:0 (12/17)
intron_pos 690:0 (13/17)
intron_pos 715:0 (14/17)
intron_pos 752:2 (15/17)
intron_pos 791:2 (16/17)
intron_pos 814:2 (17/17)
BEGIN
1 MTTKRAYKLQ EFVAHSAAVN CLKIGRKSSR KLVTGGEDHK VNLWAIGKPN TILSLQGHTS
61 GVDSVTFDAS EGLVAAGAAS GTIKLWDLEE AKIVRTLTGH RSNCISVNFH PFGEFFASGS
121 RDTNLKIWDI RKKGCIHTYK GHTRGVNVLR FTPDGRWVVS GGEDNVVKVW DLTAGKLLHE
181 FKSHEGQIQS LDFHPHEFLL ATGSADKTVK FWDLETFELI GSGGTETTGV RCLTFNPDGK
241 SVLCGLHESL KIFSWEPIRC HDGVDVGWSN LSDMNVHEGK LLGCSYNQNC VGVWVVDLSR
301 TEPMSGGTTQ SNFHPERVSG SGRDQPVLND NSSKVILRNG SQKMNPSSKE TKSLGRLSVS
361 QNPDPSPKET KSTGRSSVSQ SSDPLIRESK PLGRLSVTHS SDAVKESLTS SSTGSTSGSP
421 RRVTLTSSPK VASGVSTVVS TAAASKRNFN LKANLRTVNK DDFSPVIVPR TDPIIEQAVE
481 SRAELDIIGR TMPYSLQSKA ADSRRLSSIR NEPDLPTDSL LERSQSQPIE PSNLQDGNTF
541 TSEESGAWDT AERKNKDNRY RGFGRFNSRS LLRSPPRNHD ENSDSNGFNG NRDQSPIESR
601 RGGRLHSLAQ YRERRGRVFN SEGGHVSSSS GGNMTTPNIR PSNMVNQRGN HVPVDEGITS
661 DSEEDKAAEV MGQHDQFVSS MQSRLAKLQV VRRYWERNDV KNSISSIEKM ADNAVVADVL
721 VIITERSEVL TLDTCTSLLP LMSALLGSNI DRHLSVCLDL LLKLVRMYGS QIYSSLSAPS
781 SVGVDIEAEQ RMERYSRCFV ELEKIKACLP SLERRGGLVA KTIHELNLIF QEVSS
//