LOCUS RID68108.1 835 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010630-314
PROTEIN_ID RID68108.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 25115505)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A3"
protein /locus_tag="BRARA_C00291"
/db_xref="Phytozome:Brara.C00291"
intron_pos 146:1 (1/11)
intron_pos 198:2 (2/11)
intron_pos 215:0 (3/11)
intron_pos 253:0 (4/11)
intron_pos 387:0 (5/11)
intron_pos 516:0 (6/11)
intron_pos 548:0 (7/11)
intron_pos 587:2 (8/11)
intron_pos 622:0 (9/11)
intron_pos 622:2 (10/11)
intron_pos 801:1 (11/11)
BEGIN
1 MQTSGLKNAT IYRRQSSKRT GYEEGHKEHT EITVNTNEES NSLKPCEDPE KSLLRQGHSM
61 KNSVSVLKRI GSTVTTTVAS FASLTPETKP TRRRLKSSTE LALNGLKFIT KADGFAGWPR
121 VEKDFDRLTE KTGGSLDRSD FGDCIGIKSK EFAEALFDAL AKRQNITGHV ISKDQLQIFW
181 DKINAPDFDS RLRIFFDMAD KDLDGGLSED EVKEIIALSA SANKLKNISG KAGEYATLIM
241 EELDPYDRGY IMIEALEVLL LQGNTKAVSD LVSQQVEVSQ SRNLGKRLYN GVKYFVLDNW
301 KRLWVMALWI AVMAGLFTWK FMVYRNRPAY QVMGACVCIA KGAGETLKLN MAIILLPVCR
361 NTITLLRTKT KLGVVVPFDD NLNFHKVIAI AISIGVGLHS TSHLACDFPR LIAADEETYK
421 PMEQYFGAQP KSYVQFLKSV EVITGTVMVI LMTISFTLAT SWLRRKDYKN LPQPLKTIIG
481 FNAFWYTHHL FVIVYTLLVV HGYYVYLIKT WYRKTTWMYV MVPVVLYLSE RLVRSLRSRI
541 ESVEIKKIAV YKEGNVLCLQ ISRPNNFRYK SGQYMYLKCS DVSSLEWHPF SITSAPGDDY
601 LSVHIRDQGD WTKKLQSTFY KFFPKLVIDG PYGAPSQDYK NFDVVLLVGL GIGATPMISI
661 IKDIINNLKV NTGDEEEGRC SNTVTPPSNS PARKSELFRT KKAYFYWSTK EQGTYEWFKS
721 VMDEVSEADV NNVIELHNYC TSIFEEGDAR SALITMLQSL NHAKNGTDVV SGTRVMSHFG
781 RPKWRSIYER IAVKHPNTRV GVFYCGPATV VKELHNLATE FSQRTTKFCF HKENF
//