LOCUS GAU39557.1 1043 aa PRT CON 02-DEC-2021
DEFINITION Trifolium subterraneum hypothetical protein protein.
ACCESSION DF973767-26
PROTEIN_ID GAU39557.1
SOURCE Trifolium subterraneum
ORGANISM Trifolium subterraneum
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae;
50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade;
Trifolieae; Trifolium.
REFERENCE 1 (bases 1 to 245607)
AUTHORS Isobe,S.
TITLE Direct Submission
JOURNAL Submitted (09-NOV-2015)
Contact:Sachiko Isobe
Kazusa DNA Research Institute, Dept. of Plant Genome and Genetics;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
REFERENCE 2
AUTHORS Hirakawa,H., Kaur,P., Shirasawa,K., Nichols,P., Nagano,S.,
Appels,R., Erskine,W. and Isobe,S.N.
TITLE Draft genome sequence of subterranean clover, a reference for
genus Trifolium
JOURNAL Sci Rep 6, 30358 (2016)
REMARK Publication Status: Online-Only
DOI:10.1038/srep30358
COMMENT URL:http://clovergarden.jp/
##Genome-Assembly-Data-START##
Assembly Method :: SOAPdenovo v. 2; Newbler v. 2.7; GAM-NGS;
SSPACE
Assembly Name :: TSUd_r1.1
Genome Coverage :: 552.8x
Sequencing Technology :: HiSeq1000; Hiseq2000; Miseq; Roche454
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /cultivar="Daliak"
/db_xref="taxon:3900"
/mol_type="genomic DNA"
/note="scaffold: Tsud_sc00517.00"
/organism="Trifolium subterraneum"
protein /locus_tag="TSUD_38100"
/note="Tsud_chr1.g38110.1.am.mkhc"
/transl_table=1
intron_pos 35:0 (1/21)
intron_pos 84:0 (2/21)
intron_pos 309:2 (3/21)
intron_pos 350:1 (4/21)
intron_pos 435:1 (5/21)
intron_pos 457:2 (6/21)
intron_pos 507:1 (7/21)
intron_pos 532:0 (8/21)
intron_pos 587:0 (9/21)
intron_pos 611:0 (10/21)
intron_pos 645:0 (11/21)
intron_pos 675:0 (12/21)
intron_pos 700:1 (13/21)
intron_pos 732:2 (14/21)
intron_pos 756:0 (15/21)
intron_pos 816:0 (16/21)
intron_pos 844:0 (17/21)
intron_pos 905:2 (18/21)
intron_pos 952:0 (19/21)
intron_pos 972:0 (20/21)
intron_pos 1007:0 (21/21)
BEGIN
1 MCDDIYTVGQ GGHCNLWLKD PTISNVLCKL SHIEYGGSSV ALLEIIGSKG AVKVNGKTCG
61 NKSRLILSGG DEVVFGVSGK QAYIFQQLNN NITTPNIPSP VSILEAQGAS ITGTQVDARS
121 GDLSTVAGDS ILASFSNLNE DLSTIPPSVS TGANMQQKTD VSPLPAGNGD DKASVDMKHN
181 IINNGPDGVS SAEKTGCPSS ATIDEDPKDD TVEVNASVDA DVGKMTAATW KLRPLLHKLS
241 GSCPEIDLSG NIAKILEERK GLKELLKDVS TSTILASPKQ QALKESLQMR ILNAENIDVS
301 FENFPYYLSD TTKNVLIASA YIHLKCNASG KYVSDLPSLS PRILLSGPAV ELIVQLNFQR
361 TPLKEVDSTN ESLRPERPSV FTKRSTPAAT IHIKSKKPAS SVDAQIIGGS ASSSQFILKQ
421 EVSTASSKGG TLKTGDRVRY VGDFPSAVSS PQVFPSRGPS YGCRGKVLLA FENNGSSKIG
481 VRFEKSIPDG NDLGGLCEDD RGFFCSANHL VLVDGVGGDD SGKAAINEIF EVASNLSKTG
541 ALVLLIKDIE KGVAGNSEVL KSKFGSLPQN VVVIGSHIQP DSRKEKTQPG SLLFTKFGGN
601 QTALLDLAFP DNFTRLHDRS KETPKVMKQL NRLFPNKVTI QLPQDETLLS DWKQHLDRDI
661 ETMKAQSNVV SIRLVLNRFG LDCPDLETLS IKDQTLTTEN VEKIIGWAIS YHFMHSSETS
721 TDESKPVISA ESIHYGFNIL QGIQNENRSL KKSLKDVVTE NEFEKKLLGD VIPPTDIGVS
781 FDDIGALENV KETLKELVML PLQRPELFCK GQLTKWFGEG EKYVKAVFSL ASKIAPSVIF
841 VDEVDSMLGR RENPGEHEAM RKMKNEFMVN WDGLRTKDRE RVLVLAATNR PFDLDEAVIR
901 RLPRRLMVNL PDAANRAKIM RVILAKEELA ADVDLEALAN MTDGYSGSDL KNLCVTAAHC
961 PIREILEKEK KDKSSALAEN KPLPGLCSSA DIRPLKMEDF RYAHEQVCAS VSSDSNNMNE
1021 LVQWNDLYGE GGSRKKTSLS YFM
//