LOCUS CDQ51405.1 723 aa PRT BCT 04-FEB-2016
DEFINITION Vibrio anguillarum putative exopolysaccharide biosynthesis
protein,Wzc protein.
ACCESSION LK021130-2487
PROTEIN_ID CDQ51405.1
SOURCE Vibrio anguillarum
ORGANISM Vibrio anguillarum
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 3119695)
AUTHORS Holm K.
JOURNAL Submitted (26-MAR-2014) to the INSDC. Norstruct, Dept of Chemistry,
University of Tromso, Science Park 3, NO-9037 Tromso, NORWAY.
REFERENCE 2
AUTHORS Holm K.O., Nilsson K., Hjerde E., Willassen N.P., Milton D.L.
TITLE Complete genome sequence of Vibrio anguillarum strain NB10, a
virulent isolate from the Gulf of Bothnia
JOURNAL Stand Genomic Sci 10, 60-60(2015).
PUBMED 26380645
FEATURES Qualifiers
source /organism="Vibrio anguillarum"
/chromosome="1"
/host="Rainbow trout"
/strain="NB10"
/mol_type="genomic DNA"
/geo_loc_name="Sweden:Baltic Sea, Norrbyn Umeaa"
/isolation_source="clinical isolate, Rainbow trout"
/serovar="O1"
/db_xref="taxon:55601"
protein /transl_table=11
/gene="wzc"
/locus_tag="VANGNB10_cI2493c"
/old_locus_tag="TVA0245"
/note="user locus_tag: VANGcI2493c"
/note="IPR003856 Lipopolysaccharide biosynthesis: A number
of related proteins are involved in the synthesis of
lipopolysaccharide, O-antigen polysaccharide, capsule
polysaccharide and exopolysaccharides. Chain length
determinant protein (or wzz protein) is involved in
lipopolysaccharide (lps) biosynthesis, conferring a modal
distribution of chain length on the O-antigen component of
lps [1]. It gives rise to a reduced number of short chain
molecules and increases in numbers of longer
molecules,with a modal value of 20. The MPA/MPA2 proteins
function in CPS and EPS polymerisation and export [2].
Putative Wzc-protein? A0SQG5"
BEGIN
1 MTAQQIKQRV DTTSDEIDLG KLFGLLLDGK WIILATTTFF AIFGIAFALL STPIYKADAL
61 IQIEQKGSGG ISSLVGGEMS DLFSSESSAT TEIEIIKSRM ILGDTVHKFN LTTLVEPDYF
121 PVIGKGIARL RGQINRIQVS RLELPSYAWQ TGHQIVVQDA EQKTYQLVRE DGRVILSGKV
181 GELAKNDDYQ LFVSDLDANS GFAFNISKQS ELDAIKWLKD NLSVTERGKQ TGIVELSFTG
241 ENPSQIQAIL DDISQNYFLQ NVQRNSAEAE KSLAFLKGHL PTIKTELDSA EDVLNRYRQA
301 NDSIDLSLEA KSTLEVMVKL EAQLNELTFK ESEVSQRFTT DHPAYKSLLD KRQVLLGEKE
361 RLNQQVQKLP KTQREILRMT RDVQVNQQIY IQLLNKVQEL NIIKAGTVGN VRILDSAATY
421 AKAVKPKKPL LVVLATLLGG MLSVGGVLVK AALHRGVENP DDIEQLGLSV YASVPKSILQ
481 LEFAEKINKK RKSLQEMMLL AESNPADLSI EALRGLRTSL HFAMLEAKNN VVMISGPAPG
541 IGKSFVSTNF AAVVAKTGQK VLLIDADMRK GYLQQPFGVK WENGLSDLLS GKIDYAQAIK
601 TTQVDNLDIM TRGQVPPNPS ELLMHQRFKA LVEWASQNYD LVIIDTPPVL AVTDPSIVGA
661 HAGTTLMVAR FGLNTAKEID VARNRFEQAG IEVKGVIFNA VEKKASSSYG YGYYNYAYSS
721 DKK
//