LOCUS CDQ51331.1 115 aa PRT BCT 04-FEB-2016
DEFINITION Vibrio anguillarum putative 5-carboxymethyl-2-hydroxymuconate
delta isomerase protein.
ACCESSION LK021130-2413
PROTEIN_ID CDQ51331.1
SOURCE Vibrio anguillarum
ORGANISM Vibrio anguillarum
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 3119695)
AUTHORS Holm K.
JOURNAL Submitted (26-MAR-2014) to the INSDC. Norstruct, Dept of Chemistry,
University of Tromso, Science Park 3, NO-9037 Tromso, NORWAY.
REFERENCE 2
AUTHORS Holm K.O., Nilsson K., Hjerde E., Willassen N.P., Milton D.L.
TITLE Complete genome sequence of Vibrio anguillarum strain NB10, a
virulent isolate from the Gulf of Bothnia
JOURNAL Stand Genomic Sci 10, 60-60(2015).
PUBMED 26380645
FEATURES Qualifiers
source /organism="Vibrio anguillarum"
/chromosome="1"
/host="Rainbow trout"
/strain="NB10"
/mol_type="genomic DNA"
/geo_loc_name="Sweden:Baltic Sea, Norrbyn Umeaa"
/isolation_source="clinical isolate, Rainbow trout"
/serovar="O1"
/db_xref="taxon:55601"
protein /transl_table=11
/locus_tag="VANGNB10_cI2419c"
/old_locus_tag="TVA0171"
/note="user locus_tag: VANGcI2419c"
/note="5-carboxymethyl-2-hydroxymuconate isomerase
transforms 5-carboxymethyl-2-hydroxy-muconic acid into
5-oxo-pent-3-ene-1,2,5-tricarboxylic acid during the third
step of the homoprotocatechuate catabolic pathway
PUBMED:2194841. Homoprotocatechuate (HPC;
3,4-dihydroxyphenylacetate) is catabolized to Krebs cycle
intermediates via extradiol (meta-) cleavage and the
necessary enzymes are chromosomally encoded in a variety
of bacteria PUBMED:8384293.
5-carboxymethyl-2-hydroxymuconate isomerase is probably a
dimer of two identical subunits PUBMED:2194841. A
comparison of the N-terminal half of the
isomerase/decarboxylase sequence from the pathway (both
encoded by the gene hpcE), with the second half showed
significant similarity. This suggests that a duplication
may have occurred to produce a bifunctional gene
PUBMED:8223600."
BEGIN
1 MPNLVMEYSN SVDERVNVQG LLEDLHQVAL RCGLFDADSV KSRALRCHHW CIGEEGDSVD
61 FIHLSFDLLS GRTPEQKREL SRQLMTVLQQ QASQVRSLTV NVRDMDKDCF QKVVN
//