LOCUS CDQ51250.1 179 aa PRT BCT 04-FEB-2016
DEFINITION Vibrio anguillarum 50S ribosomal protein L5 protein.
ACCESSION LK021130-2332
PROTEIN_ID CDQ51250.1
SOURCE Vibrio anguillarum
ORGANISM Vibrio anguillarum
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 3119695)
AUTHORS Holm K.
JOURNAL Submitted (26-MAR-2014) to the INSDC. Norstruct, Dept of Chemistry,
University of Tromso, Science Park 3, NO-9037 Tromso, NORWAY.
REFERENCE 2
AUTHORS Holm K.O., Nilsson K., Hjerde E., Willassen N.P., Milton D.L.
TITLE Complete genome sequence of Vibrio anguillarum strain NB10, a
virulent isolate from the Gulf of Bothnia
JOURNAL Stand Genomic Sci 10, 60-60(2015).
PUBMED 26380645
FEATURES Qualifiers
source /organism="Vibrio anguillarum"
/chromosome="1"
/host="Rainbow trout"
/strain="NB10"
/mol_type="genomic DNA"
/geo_loc_name="Sweden:Baltic Sea, Norrbyn Umeaa"
/isolation_source="clinical isolate, Rainbow trout"
/serovar="O1"
/db_xref="taxon:55601"
protein /transl_table=11
/gene="rplE"
/locus_tag="VANGNB10_cI2338c"
/old_locus_tag="TVA0088"
/function="This is 1 of the proteins that binds and
probably mediates the attachment of the 5S RNA into the
large ribosomal subunit, where it forms part of the
central protuberance. In the 70S ribosome it contacts
protein S13 of the 30S subunit (bridge B1b), connecting
the 2 subunits; this bridge is implicated in subunit
movement. Contacts the P site tRNA; the 5S rRNA and some
of its associated proteins might help stabilize
positioning of ribosome-bound tRNAs (By similarity)."
/note="user locus_tag: VANGcI2338c"
BEGIN
1 MAKLHDYYKS SVVTELTKQF GYTSVMQVPR IDKITLNMGV GEAINDKKLL ENAAADMATI
61 SGQKPLITKA RKSVAGFKIR EGYPIGCKVT LRGERMWDFL ERLISIALPR VRDFRGVSAK
121 SFDGRGNYSM GVREQIIFPE IDYDKVDRVR GLDITITTSA GTDEEGRALL AAFNFPFRK
//