LOCUS CDQ51001.1 192 aa PRT BCT 04-FEB-2016
DEFINITION Vibrio anguillarum Putative uncharacterized (PUA-containing)
protein protein.
ACCESSION LK021130-2083
PROTEIN_ID CDQ51001.1
SOURCE Vibrio anguillarum
ORGANISM Vibrio anguillarum
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 3119695)
AUTHORS Holm K.
JOURNAL Submitted (26-MAR-2014) to the INSDC. Norstruct, Dept of Chemistry,
University of Tromso, Science Park 3, NO-9037 Tromso, NORWAY.
REFERENCE 2
AUTHORS Holm K.O., Nilsson K., Hjerde E., Willassen N.P., Milton D.L.
TITLE Complete genome sequence of Vibrio anguillarum strain NB10, a
virulent isolate from the Gulf of Bothnia
JOURNAL Stand Genomic Sci 10, 60-60(2015).
PUBMED 26380645
FEATURES Qualifiers
source /organism="Vibrio anguillarum"
/chromosome="1"
/host="Rainbow trout"
/strain="NB10"
/mol_type="genomic DNA"
/geo_loc_name="Sweden:Baltic Sea, Norrbyn Umeaa"
/isolation_source="clinical isolate, Rainbow trout"
/serovar="O1"
/db_xref="taxon:55601"
protein /transl_table=11
/locus_tag="VANGNB10_cI2089c"
/old_locus_tag="TVA1004"
/note="user locus_tag: VANGcI2089c"
/note="IPR015947: This entry represents domains with a
PUA-like structure, consisting of a pseudo-barrel composed
of mixed folded sheets of five strands. The PUA
(PseudoUridine synthase and Archaeosine transglycosylase)
domain is a highly conserved RNA-binding motif found in a
wide range of archaeal, bacterial and eukaryotic
proteins,including enzymes that catalyse tRNA and rRNA
post-transcriptional modifications, proteins involved in
ribosome biogenesis and translation, as well as in enzymes
involved in proline biosynthesis [PMID: 16793063, PMID:
16407303]. The structures of several PUA-RNA complexes
reveal a common RNA recognition surface, but also some
versatility in the way in which the motif binds to RNA
[PMID: 17803682]. N-terminus part contains a peptidase
signature, a putative ATP-dependent serine peptidases
belonging to the MEROPS peptidase family S16 (lon protease
family, clan SF), cfr IPR003111."
BEGIN
1 MMKKLMLFPL ASIVLPEGKM KLRIFESRYK RMATQSSQSD STFGICLIDN KKGNKANQLS
61 KFGMLVKIVD FEALDNGMLG LTVMGMERFK IESVVSEFDG LRVAQVTSLP SWPVRDLEPH
121 EWYLSHQLQA VYQQFPQLGE LYSHCFFDDA SWVAQRWLEL LPISIQQFDD LMRQDDAHSA
181 VDFLLQVIEV SH
//