LOCUS CDQ50112.1 294 aa PRT BCT 04-FEB-2016
DEFINITION Vibrio anguillarum Putative HTH-type transcriptional regulator
YpdC protein.
ACCESSION LK021130-1194
PROTEIN_ID CDQ50112.1
SOURCE Vibrio anguillarum
ORGANISM Vibrio anguillarum
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 3119695)
AUTHORS Holm K.
JOURNAL Submitted (26-MAR-2014) to the INSDC. Norstruct, Dept of Chemistry,
University of Tromso, Science Park 3, NO-9037 Tromso, NORWAY.
REFERENCE 2
AUTHORS Holm K.O., Nilsson K., Hjerde E., Willassen N.P., Milton D.L.
TITLE Complete genome sequence of Vibrio anguillarum strain NB10, a
virulent isolate from the Gulf of Bothnia
JOURNAL Stand Genomic Sci 10, 60-60(2015).
PUBMED 26380645
FEATURES Qualifiers
source /organism="Vibrio anguillarum"
/chromosome="1"
/host="Rainbow trout"
/strain="NB10"
/mol_type="genomic DNA"
/geo_loc_name="Sweden:Baltic Sea, Norrbyn Umeaa"
/isolation_source="clinical isolate, Rainbow trout"
/serovar="O1"
/db_xref="taxon:55601"
protein /transl_table=11
/gene="ypdC"
/locus_tag="VANGNB10_cI1198"
/old_locus_tag="TVA1618"
/note="user locus_tag: VANGcI1198"
/note="Similar to Escherichia coli (strain K12) ypdc
recname: full=uncharacterized hth-type transcriptional
regulator ypdc UniProt:P77396 (285 aa) fasta scores:
E()=6e-33, 33.3% id in 273 aa"
BEGIN
1 MPRFIDGYRV SFVIPVFKNV IEVLLSERES FNRIWFAGDK ITPPAFSYQV NFPRLELVLS
61 GVYSNEIEEI EHGISKVNIL SGDALYIPPN CWNKPDWQES CSVLSLLFGR RQMGFSLVSK
121 HKGESGFYDV QKHSIPTRTG HAIDHMLEGL NALAREPQKS PMDEHLLLAL LSYSATMLDQ
181 PTASPKKRSE DLYQGICIYI QENFHRNICR DSIAQRFNIS ANHLSRMFRQ QGHMTLADYI
241 TWVRIERAKF MLKKYTFRLA EVATRCGFQD VNYFFRVFKS KAGMTPSEYR TLSQ
//