LOCUS CDQ48736.1 382 aa PRT BCT 04-FEB-2016
DEFINITION Vibrio anguillarum 23S rRNA (uracil-5-)-methyltransferase
RumB protein.
ACCESSION LK021129-839
PROTEIN_ID CDQ48736.1
SOURCE Vibrio anguillarum
ORGANISM Vibrio anguillarum
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 1187342)
AUTHORS Holm K.
JOURNAL Submitted (26-MAR-2014) to the INSDC. Norstruct, Dept of Chemistry,
University of Tromso, Science Park 3, NO-9037 Tromso, NORWAY.
REFERENCE 2
AUTHORS Holm K.O., Nilsson K., Hjerde E., Willassen N.P., Milton D.L.
TITLE Complete genome sequence of Vibrio anguillarum strain NB10, a
virulent isolate from the Gulf of Bothnia
JOURNAL Stand Genomic Sci 10, 60-60(2015).
PUBMED 26380645
FEATURES Qualifiers
source /organism="Vibrio anguillarum"
/chromosome="2"
/host="Rainbow trout"
/strain="NB10"
/mol_type="genomic DNA"
/geo_loc_name="Sweden:Baltic Sea, Norrbyn Umeaa"
/isolation_source="clinical isolate, Rainbow trout"
/serovar="O1"
/db_xref="taxon:55601"
protein /transl_table=11
/gene="rumB"
/gene_synonym="ybjF"
/locus_tag="VANGNB10_cII0839c"
/old_locus_tag="TVA2393"
/note="user locus_tag: VANGcII0839c"
/note="This (product) family consists of RNA
methyltransferases designated RumB, formerly YbjF. Members
act on 23S rRNA U747 and the equivalent position in other
proteobacterial species. This family is homologous to the
other 23S rRNA methyltransferase RumA and to the tRNA
methyltransferase TrmA"
BEGIN
1 MQCAFFDQQL CRSCTHCAVS YSEQVKRKDL ALKALFSTQM PQQWLEPVIS EETGFRNKAK
61 MVALGAAHAP ILGVESMVDG QSTPVSLVQC ALYPQETQAL LTYLQDWIRS SGIPPYNKAK
121 KKGELKYILL TRSEYSGEFM LRFVLRSREA LGRVEQNLAR LQAQFPTIRV VSVNLQPIHM
181 ARLEGEEEIF LTECEYLIEQ FNQVPMVIRP KSFFQTNPHV AKQLYAAARD WVREINPSHM
241 WDLFCGVGGF ALHCASPTTA VTGIEIEPEA IASAKRSAKT MGITNLDFAA LDSAQFSQAQ
301 SIAPELVLVN PPRRGLGAEL VERLVALSPK HIIYSSCNPQ TLITDMQGMV GYLPKKLQWF
361 DMFPHTDHSE VMVLLERQPK PR
//