LOCUS       CAR56088.1               372 aa    PRT              BCT 06-FEB-2015
DEFINITION  Burkholderia cenocepacia J2315 transcriptional regulator
            PchR protein.
ACCESSION   AM747721-2235
PROTEIN_ID  CAR56088.1
SOURCE      Burkholderia cenocepacia J2315
  ORGANISM  Burkholderia cenocepacia J2315
            Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
            Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
REFERENCE   1  (bases 1 to 3217062)
  AUTHORS   Holden M.T.G.
  JOURNAL   Submitted (20-JUN-2007) to the INSDC. Holden M.T.G., The Pathogen
            Sequencing Unit, The Wellcome Trust Sanger Institute, The Wellcome
            Trust Genome Campus, CB10 1SA, UNITED KINGDOM.
REFERENCE   2
  AUTHORS   Holden M.T., Seth-Smith H.M., Crossman L.C., Sebaihia M.,
            Bentley S.D., Cerdeno-Tarraga A.M., Thomson N.R., Bason N.,
            Quail M.A., Sharp S., Cherevach I., Churcher C., Goodhead I.,
            Hauser H., Holroyd N., Mungall K., Scott P., Walker D., White B.,
            Rose H., Iversen P., Mil-Homens D., Rocha E.P., Fialho A.M.,
            Baldwin A., Dowson C., Barrell B.G., Govan J.R., Vandamme P.,
            Hart C.A., Mahenthiralingam E., Parkhill J.
  TITLE     The genome of Burkholderia cenocepacia J2315, an epidemic pathogen
            of cystic fibrosis patients
  JOURNAL   J. Bacteriol. 191(1), 261-277(2009).
   PUBMED   18931103
FEATURES             Qualifiers
     source          /organism="Burkholderia cenocepacia J2315"
                     /chromosome="2"
                     /strain="J2315"
                     /mol_type="genomic DNA"
                     /geo_loc_name="United Kingdom:Edinburgh"
                     /isolation_source="cystic fibrosis patient"
                     /note="representative of the ET12 epidemic lineage"
                     /db_xref="taxon:216591"
     protein         /transl_table=11
                     /gene="pchR"
                     /locus_tag="BCAM2231"
                     /note="Similar to Pseudomonas aeruginosa. PchR
                     UniProt:P40883 (EMBL:AR403595 (296 aa) fasta scores:
                     E()=4.6e-75, 68.571% id in 280 aa, and to Burkholderia
                     cenocepacia HI2424 helix-turn-helix, AraC type.
                     UniProt:Q4LVD0 (EMBL:AAHL01000012) (372 aa) fasta scores:
                     E()=7.6e-146, 97.581% id in 372 aa. Possible alternative
                     start site at codon 60. Burkholderia genome sequencing
                     projects predict the longer CDS, whilst experimental
                     evidence from Pseudomonas aeruginosa predicts the shorter
                     form of the CDS"
                     /db_xref="EnsemblGenomes-Gn:BCAM2231"
                     /db_xref="EnsemblGenomes-Tr:CAR56088"
                     /db_xref="GOA:B4EGG2"
                     /db_xref="InterPro:IPR009057"
                     /db_xref="InterPro:IPR018060"
                     /db_xref="InterPro:IPR018062"
                     /db_xref="UniProtKB/TrEMBL:B4EGG2"
BEGIN
        1 MRGIIICNRC CDSAVSFDIA AISFDRAPVA RHPPGPAGQS AGCRRRAPVR ACRLTNGPPM
       61 RSTSFASSRR HPPVLVPGNH PGVVHIDTGM KLMSGTLCSD SRDWYEEPLE KGLKLVLVQS
      121 GQLRCRVPGQ PEQCIKGPGL CVIANDGEFT THQIYDRDVP LRYTIVQLGL DALDRNLSLL
      181 PEKMLAPTGG DPRIVSCPAS KALQALAVQI ATCPFEGAVR EYYLKAKAFE LTALSAQLLA
      241 TQRQSAPADV RVTSSDVERV YAASDILTRE LQHPPTLDAL AGRVGMNSRK LTAGFRKVFG
      301 TSVYAYLQEY RLRTAHAMLC AEDANVSTVA YRVGYSPAHF SIAFRKRYGI SPSDIRVSPN
      361 AMDPEELTGA AI
//