LOCUS CAR56027.1 2365 aa PRT BCT 06-FEB-2015
DEFINITION Burkholderia cenocepacia J2315 putative outer membrane
autotransporter protein.
ACCESSION AM747721-2174
PROTEIN_ID CAR56027.1
SOURCE Burkholderia cenocepacia J2315
ORGANISM Burkholderia cenocepacia J2315
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
REFERENCE 1 (bases 1 to 3217062)
AUTHORS Holden M.T.G.
JOURNAL Submitted (20-JUN-2007) to the INSDC. Holden M.T.G., The Pathogen
Sequencing Unit, The Wellcome Trust Sanger Institute, The Wellcome
Trust Genome Campus, CB10 1SA, UNITED KINGDOM.
REFERENCE 2
AUTHORS Holden M.T., Seth-Smith H.M., Crossman L.C., Sebaihia M.,
Bentley S.D., Cerdeno-Tarraga A.M., Thomson N.R., Bason N.,
Quail M.A., Sharp S., Cherevach I., Churcher C., Goodhead I.,
Hauser H., Holroyd N., Mungall K., Scott P., Walker D., White B.,
Rose H., Iversen P., Mil-Homens D., Rocha E.P., Fialho A.M.,
Baldwin A., Dowson C., Barrell B.G., Govan J.R., Vandamme P.,
Hart C.A., Mahenthiralingam E., Parkhill J.
TITLE The genome of Burkholderia cenocepacia J2315, an epidemic pathogen
of cystic fibrosis patients
JOURNAL J. Bacteriol. 191(1), 261-277(2009).
PUBMED 18931103
FEATURES Qualifiers
source /organism="Burkholderia cenocepacia J2315"
/chromosome="2"
/strain="J2315"
/mol_type="genomic DNA"
/geo_loc_name="United Kingdom:Edinburgh"
/isolation_source="cystic fibrosis patient"
/note="representative of the ET12 epidemic lineage"
/db_xref="taxon:216591"
protein /transl_table=11
/locus_tag="BCAM2169"
/note="Similar to C-terminus from codon 2485 of
Burkholderia pseudomallei (Pseudomonas pseudomallei) BpaA.
UniProt:Q6Y660 (EMBL:AY177757) (5431 aa) fasta scores:
E()=2.3e-47, 26.575% id in 2555 aa, and similar to entire
protein of Burkholderia ambifaria AMMD outer membrane
autotransporter barrel precursor. UniProt:Q3F6T0
(EMBL:AAJL01000009) (2371 aa) fasta scores: E()=0, 85.799%
id in 2366 aa"
/db_xref="EnsemblGenomes-Gn:BCAM2169"
/db_xref="EnsemblGenomes-Tr:CAR56027"
/db_xref="InterPro:IPR005546"
/db_xref="InterPro:IPR011050"
/db_xref="InterPro:IPR013425"
/db_xref="InterPro:IPR036709"
/db_xref="UniProtKB/TrEMBL:B4EFW6"
BEGIN
1 MNTARSKKAS EPFPRLLLPT GVFLALSGAG IVPAHATCSQ AGTTVTCSGV ANPLAPSFSS
61 NLNNINATVN PGASVGVLLG LGGTAMSLTG NNTTLTNNGT IDPSALGSGL GVLSSGAVIG
121 NAAASSVNVT NNGVMNGSTG VAISGVTGMA LSVQNGTGGT STITNTGSIG SSALVGATLI
181 GADAPVVAAY GGGTVNMTNS GTISGRVSFG SNNAPGGGNT FTNSGVINGS VSMGANSTNT
241 FNAITGSQVN TAGGTGGAFN ITVGANTLNV AQTGIVDGGS GGNNTLNLQQ GASANGTIAV
301 NNYINFNHLN VQGGNWTING ASTAQDATLS GGVAIINDNA SLGTGNITGN GGALQAGTAG
361 LNVSNNVSLG VGGLTVQGTT GLTLSGTVSG GGALTKNDGG TLTLSGANSY TGGTNLNAGG
421 LVIGNNSALG IGTLNVNASA SLDTSTNVTL GNTVNLASGS TLSIGGSNSL GLTGAINGSG
481 GLVKNGAATT TLSGVNTYTG GTTINSGTLA LNGAGSLSAT GTVNLTGAGA TFDVSAASGA
541 QTIGSLAGAA GTNVNLGVNS LTLGGTGNAT YAGTIGGSGS VTLSGTGVQS LTGTNVYTGG
601 TNLNGGNLVV GSNTALGSGA VNVNGSSTLD ATTNVTLANG VNLATGTTLT LGGGTDLGLG
661 GVISGGGGLV KNGAAALTLN GANNYTGGTT LNAGSLVLGN GSALGTGALT VGGAATLDTN
721 ASLSVGNAIG LGTGATLTLG GSNALGLSGA ISGTGALVKN GASTTTLTGA NTYTGGTTIN
781 AGTLALGAGG SLSSTGTVNL VNAGATLDIS AGSAQSIGAL SGGVGTSVSL GANALTLGGT
841 ASGTFSGTIG GTGSLTLAGT GTQTLNGANT YTGGTNLNSG SLVLGNNGAL GSGALNVGGA
901 ATLDTNASLS VGNAVNLGTG AALTLGGSNN LTLGGAISGA GSLVKNGVAT TTLTGANTYT
961 GGTTINAGTL ALGAGGSLAS TGAMNLAGVG ATLDLGGATG GQTLGALSGV AGTNINLGNN
1021 ALTLGGTASG TFGGAIGGTG SLTLAGTGTQ TLNGASTYSG GTNLNSGGVV LGNNTALGTG
1081 TVNVGGAATL DTNASLTVAN AVNLGTGAAL TLGGSNALDL SGAISGAGSL VKNGAATTTL
1141 TGANTYTGGT TINAGTLAVG AGGSLASTGA MNLASAGATL DLSAATGAQT LGALSGVAGT
1201 NLNLGGNALT LGGTASGTFS GAIGGTGSLT LAGTGTQTLS GANTYTGGTT IGGGSTLALG
1261 AGGSLASTGT VNLAGAGATF DLSGASGAQT IGALTGAAGT NVNLGGNGLT LSGNGSNTFG
1321 GAIGGAGGLT LAGSGTQTLT GANTYTGGTT ISGGGTLALG AGGSLASTGA VTLAGTGATL
1381 DLSGATGAQT IGTLAGAGGT SVNLGANALT LNATTNGTFG GAIGGTGGVT VAGTGTQTLT
1441 GANTYTGGTT INGGSTLALG AGGSLASGGA VTLAGAGATF DVSGATAAQT LGTLTGAAGT
1501 NVNLGANALT LNGSGNGTFG GAIGGTGGVT FAGTGTQTLT GANTYTGGTT INGGSTLALG
1561 AGGSLASGST LNLAGTGATF DMSAASGAQT IGALSGVGGT NVNLGANTLT LNGSGNNTFG
1621 GTIGGTGGVT LAGTGTQTLT GANTYTGGTT IHGGSTLALG AGGSLASTGA VNLAGTGATF
1681 DVSAATGTQT IGALSGAAGT NVNLGANALA LNGTGSSTFG GTIDGSGSVT VASGTQVLTG
1741 GNTYTGGTTI AAGGTLQLGN GGTSGSVAGN VVDNGALIVN QSGNVTIASV LSGTGSLTQA
1801 GSGQLTLTGA STLSGPTTVS AGTLAVNGSL GQSTVTVQSG ATLTGTGTVG GLVVQNGATA
1861 AATQPGAALN VGGNVTFQPG STFQVAATPQ QSGSLAASGT AMLNGGTVQV LANQSAYQPS
1921 TTYTILSASS GVQGAFTQVS ANYAFLTPTL SYDPGHVYLR LVQNGTSLPD VATTPNQRSV
1981 ATALGGLGAG NPLYDAVLTT DAPTARRAYG LLDGELQASL KSMLLLDSRY VRDAVTDRVR
2041 QGLAPGSGPL AALSSGGAAL CGDNTAGVAD PTLPPERRIG SRDGCYGGTP YQPVVWGQAF
2101 GGRSRLAGDG NASTINRSMT GFIAGADMAL NDKWRAGLAA GVTHSSLDND QSSSAAVNSY
2161 YLSLYGGAQY GALGVRGGAS YTWYRINSDR YPGFAGFSDH DSAGYNANSA QVFGEVGYAL
2221 PVGPVAIEPF AGLAYVNLHT DGYTETGGAA ALRAGGETTH VGFSTLGLRA ASQLGSIASG
2281 TFTARGTVGW RHAFGNVRPS SAFTFANGGT SFQVSGVPIA RDSAVLEAGI DANVTKRLTL
2341 GLTYSGQYGS GVRDNAILGN ILWKF
//