LOCUS CAR56000.1 599 aa PRT BCT 06-FEB-2015
DEFINITION Burkholderia cenocepacia J2315 transport system outer
membrane protein protein.
ACCESSION AM747721-2147
PROTEIN_ID CAR56000.1
SOURCE Burkholderia cenocepacia J2315
ORGANISM Burkholderia cenocepacia J2315
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
REFERENCE 1 (bases 1 to 3217062)
AUTHORS Holden M.T.G.
JOURNAL Submitted (20-JUN-2007) to the INSDC. Holden M.T.G., The Pathogen
Sequencing Unit, The Wellcome Trust Sanger Institute, The Wellcome
Trust Genome Campus, CB10 1SA, UNITED KINGDOM.
REFERENCE 2
AUTHORS Holden M.T., Seth-Smith H.M., Crossman L.C., Sebaihia M.,
Bentley S.D., Cerdeno-Tarraga A.M., Thomson N.R., Bason N.,
Quail M.A., Sharp S., Cherevach I., Churcher C., Goodhead I.,
Hauser H., Holroyd N., Mungall K., Scott P., Walker D., White B.,
Rose H., Iversen P., Mil-Homens D., Rocha E.P., Fialho A.M.,
Baldwin A., Dowson C., Barrell B.G., Govan J.R., Vandamme P.,
Hart C.A., Mahenthiralingam E., Parkhill J.
TITLE The genome of Burkholderia cenocepacia J2315, an epidemic pathogen
of cystic fibrosis patients
JOURNAL J. Bacteriol. 191(1), 261-277(2009).
PUBMED 18931103
FEATURES Qualifiers
source /organism="Burkholderia cenocepacia J2315"
/chromosome="2"
/strain="J2315"
/mol_type="genomic DNA"
/geo_loc_name="United Kingdom:Edinburgh"
/isolation_source="cystic fibrosis patient"
/note="representative of the ET12 epidemic lineage"
/db_xref="taxon:216591"
protein /transl_table=11
/locus_tag="BCAM2142"
/note="Similar, but extended at the N-terminus, to
Ralstonia solanacearum (pseudomonas solanacearum) probable
typeisecretion system outer membrane efflux transmembrane
protein UniProt:Q8XQP1 (EMBL:AL646053 (483 aa) fasta
scores: E()=2.3e-102, 68.107% id in 486 aa"
/db_xref="EnsemblGenomes-Gn:BCAM2142"
/db_xref="EnsemblGenomes-Tr:CAR56000"
/db_xref="GOA:B4EFT9"
/db_xref="InterPro:IPR003423"
/db_xref="UniProtKB/TrEMBL:B4EFT9"
BEGIN
1 MLKTTACSRF TVRRAARAAR AVFHPGHVLF AIALFDTASV AFASSSSPLP SGRLTDSFET
61 AVRVPAPAAQ AAAASPPRSL PPGSPRGAAP AMHTAMAPSF VPLPAGMPAA AAAAPRRHLA
121 PPLPPADPAR RIVLANLSRA MAPGDLPSPV PLPHDGVTTI TPDLPDAFDT PAAAHAADPE
181 DAEDSAGASG ETLRIALDRL TLRDAVGVAI ARHPDIGRAH AEVAQSLSEV EVAKAAWYPK
241 IDYGVRPGYG GSFGSNGNRT GTRASIGVSQ LLYDFGRTSG RISAADSTRS QKQYQLADTI
301 ETVAYQTAST FIELAASQDV VAAARRQVAA LSDTRTKILD RVRAGLSVSS DRNLVELAIL
361 HAQAEVLKAN TRFDVAAAKL TELIGARPRR VAPLGGTVDF VGDLGHAGGD IERTPSVLAA
421 AAAVDAADAR VRVAQAERFP SIGIGASRSI SSGRPNATND TWIGFAVSGN YSLGGLAKHQ
481 IAAAEAELRA NRESLENRRL VTRSALKSAE IEASGAAARL NSYEKVTALS RASRDLYWQE
541 YILNKRTLTD VVNPERDIFE SEVEAINALA DGAIARIKAY VAVGKFVELL REHEGSRHE
//