LOCUS CAR54874.1 1022 aa PRT BCT 06-FEB-2015
DEFINITION Burkholderia cenocepacia J2315 formate dehydrogenase,
major subunit protein.
ACCESSION AM747721-1021
PROTEIN_ID CAR54874.1
SOURCE Burkholderia cenocepacia J2315
ORGANISM Burkholderia cenocepacia J2315
Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
REFERENCE 1 (bases 1 to 3217062)
AUTHORS Holden M.T.G.
JOURNAL Submitted (20-JUN-2007) to the INSDC. Holden M.T.G., The Pathogen
Sequencing Unit, The Wellcome Trust Sanger Institute, The Wellcome
Trust Genome Campus, CB10 1SA, UNITED KINGDOM.
REFERENCE 2
AUTHORS Holden M.T., Seth-Smith H.M., Crossman L.C., Sebaihia M.,
Bentley S.D., Cerdeno-Tarraga A.M., Thomson N.R., Bason N.,
Quail M.A., Sharp S., Cherevach I., Churcher C., Goodhead I.,
Hauser H., Holroyd N., Mungall K., Scott P., Walker D., White B.,
Rose H., Iversen P., Mil-Homens D., Rocha E.P., Fialho A.M.,
Baldwin A., Dowson C., Barrell B.G., Govan J.R., Vandamme P.,
Hart C.A., Mahenthiralingam E., Parkhill J.
TITLE The genome of Burkholderia cenocepacia J2315, an epidemic pathogen
of cystic fibrosis patients
JOURNAL J. Bacteriol. 191(1), 261-277(2009).
PUBMED 18931103
FEATURES Qualifiers
source /organism="Burkholderia cenocepacia J2315"
/chromosome="2"
/strain="J2315"
/mol_type="genomic DNA"
/geo_loc_name="United Kingdom:Edinburgh"
/isolation_source="cystic fibrosis patient"
/note="representative of the ET12 epidemic lineage"
/db_xref="taxon:216591"
protein /transl_table=11
/gene="fdnG"
/locus_tag="BCAM1017"
/EC_number="1.2.1.2"
/note="This CDS contains an in-frame opal codon, UGA, at
position 197. This opal codon encodes selenocysteine,
which forms the active-site of the protein"
/db_xref="EnsemblGenomes-Gn:BCAM1017"
/db_xref="EnsemblGenomes-Tr:CAR54874"
/db_xref="GOA:B4EFM5"
/db_xref="InterPro:IPR006311"
/db_xref="InterPro:IPR006443"
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006657"
/db_xref="InterPro:IPR006963"
/db_xref="InterPro:IPR009010"
/db_xref="InterPro:IPR027467"
/db_xref="UniProtKB/TrEMBL:B4EFM5"
intron_pos 197:0 (1/1)
BEGIN
1 MLQMSRRQFL KVTATSLAGS SLALMGFSPS EALAEVRQYK LARTVETRNT CPYCSVGCGI
61 LMYSLGDGAK NAQPSIIHIE GDPDHPVNRG TLCPKGASLI DFIHSPNRLT HPEYRAPGSD
121 KWEPISWNDA LDRIAKLMKA DRDANFVETA EDGAKVNRWL TTGMLAASAG SNEVGYLTHK
181 TIRSLGMLAF DNQARVHGPT VAGLAPTFGR GAMTNHWVDI KNADVILVMG GNAAEAHPCG
241 FKWVTEAKAH RKARLIVVDP RFTRTASVAD YYAPIRTGTD IVFLGGVINY LLTNDKIQHE
301 YVKNYTDFSF IVREDFAFND GIYSGYDAEK HAYPDKSSWD YERGDDGFAK VDPTLQHPRC
361 VYNLLKQHYA RYTADMVQQV CGTPKDKFLK VCEMLASTAV PGRAGTVLYA LGWTHHSIGA
421 QIIRTGAMVQ LLLGNIGIAG GGMNALRGHS NIQGLTDLGL MSNLLPGYMT LPMQAEQDFD
481 AYIKKRVQQP LRPNQLSYWK NYKAFHVSFM KSWWGDAATA ENNWAYDYLP KLDKQYDLLQ
541 AIELMNAGKM NGYICQGFNP LAAAPSKVKT AAGLAKLKWL VIMDPLATET SEFWKPHGDY
601 NDVDPSKIQT EVFRLPTTCF AEENGSLVSS SRVLQWHWKG AEPPGEARSD LEIMSGLFLR
661 MRKLYQKDGG KYPDPIVNLT WPYANPESPT PEELAMEFNG KALADLPDPK DPAKTLVKKG
721 EQLAAFAQLK DDGTTASGCW IFCGAWTQAG NQMGRRDNSD PTGIGQTLNW AWAWPANRRI
781 LYNRASCDVA GKPFDPTRKL IGWNGSAWKG ADIPDFKADE PPENGMGPFI MNPEGVARFF
841 ARAGMNEGPF PEHYEPFETP LAANPLHPNN PQALNNPAAR VFPDDRASFG KVAEFPHVAT
901 TYRLTEHFHY WTKHARLNSI IQPEQFVEIG EDLAKEVGVA HGERVKVSSK RGYIIAVALV
961 TKRIKPLTVD GKKVQTVGVP LHWGFKGLTK PGYLANTLTP SVGDGNSYTP EFKSFLVKVE
1021 KA
//