LOCUS CAQ85161.1 4068 aa PRT BCT 27-FEB-2015
DEFINITION Photorhabdus asymbiotica similar to rtx toxin rtxa protein.
ACCESSION FM162591-3068
PROTEIN_ID CAQ85161.1
SOURCE Photorhabdus asymbiotica
ORGANISM Photorhabdus asymbiotica
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Morganellaceae; Photorhabdus.
REFERENCE 1 (bases 1 to 5064808)
AUTHORS Crossman L.C.
JOURNAL Submitted (21-MAY-2008) to the INSDC. Crossman L.C., Pathogen
Sequencing Unit, The Wellcome Trust Sanger Institute, Hinxton,
Cambridge, Cambridgeshire, CB10 1SA, UNITED KINGDOM.
REFERENCE 2
AUTHORS Wilkinson P., Waterfield N.R., Crossman L., Corton C.,
Sanchez-Contreras M., Vlisidou I., Barron A., Bignell A., Clark L.,
Doggett J., Ormond D., Mayho M., Bason N., Smith F., Simmonds M.,
Arrowsmith C., Churcher C., Harris D., Thompson N.R., Quail M.,
Parkhill J., Ffrench-Constant R.H.
TITLE Comparative genomics of the emerging human pathogen Photorhabdus
asymbiotica with the insect pathogen Photorhabdus luminescens
JOURNAL BMC Genomics 10(1), 302-302(2009).
PUBMED 19583835
FEATURES Qualifiers
source /organism="Photorhabdus asymbiotica"
/isolate="ATCC43949"
/mol_type="genomic DNA"
/db_xref="taxon:291112"
protein /transl_table=11
/locus_tag="PAU_03073"
/old_locus_tag="PAT0926"
/note="The RTX (repeats in toxin) family of cytolytic
toxins belong to the Type I secretion system, and are
important virulence factors in Gram-negative bacteria."
/db_xref="EnsemblGenomes-Gn:PAU_03073"
/db_xref="EnsemblGenomes-Tr:CAQ85161"
/db_xref="InterPro:IPR011049"
/db_xref="InterPro:IPR011509"
/db_xref="InterPro:IPR020974"
/db_xref="InterPro:IPR022742"
/db_xref="InterPro:IPR029058"
/db_xref="InterPro:IPR038383"
/db_xref="UniProtKB/TrEMBL:B6VMW7"
/inference="similar to DNA sequence:INSD:AE004223"
/inference="similar to DNA sequence:INSD:BX571863"
intron_pos 2295:0 (1/1)
BEGIN
1 MGKSSNRSTE YFFTGKYYDD NDGNSIVAIG VGGDVYAYGG DDDITVGSLK VDVYHTNGEL
61 SVKGASGYTG IRKTGNGGLS FSGASGAAFI NHTGETGNLY YSGVAGYNKL TRKGLSGNTS
121 FKGAGGYNQL WHETDQGNIY FAGAGGANEI DRIWFNDYQG TQGDVTFNGA GAANSIDSRI
181 ESGDITLNGV GADNHIVREG RKGNIILRGA GAANRIERIR HSEDGYKQTH GNIILEGAGG
241 YNKLYSDVAH GNIHFTGAGA YNEITRTGAK NEIAFAQAKD IIMTSATMEG RWIQQSGQVK
301 AVKSVVEPDT YLFAIANDVN TKVVAVRLQN NPDTGKLRYY VTAWYKAGDH LKDIAKENIN
361 VNNGFIPVKE EGAITLANIN FVYRQETTIQ GVEASLLTDK WVNYADGNNI KAEDVTLGRA
421 KMGGYAISSD GLKIDVSPVK SNDQLNTYIY AIFLDPYTKV VEVKLANDYE TGKLKYIARS
481 WYKKGDHTSR IANETFSYPG GYRSIGAGYT LSQLHYDLNV ADDIADCLTD LESYSEQDFI
541 ESSKSGGDSS GDIYFNGAGG GNVITSNVTH GNINFTGAGM ANVILHNSTF GNTYFDGGGG
601 ANVIVKNGEE GNLSFRGAGL ANVLVHHNLH GEMDIYAGGA ANVLVRVGDG RYLAHLLAYG
661 NISIHKGNGN SRVRMLGGYN THTQIGDGNA DWFGAGGFNV ITQAGKGHIS SVFLGGANVL
721 TKLGTGDLVS GMLGGANIIT HLSDKTETSN TTSIALGGTN ILTKKGKGNA LAIMGGGANV
781 LTHIGDGNTT GIMLGGANIL TKVGQGDTTG IMFGIGNVFT HVGGDLTLGV MAAAGNIFTK
841 VGDGTSIAAM MGAGNLFTHV GKGDAWALMG GAVNVFTKVG DGNALALMVA AGNVFTHIGD
901 GTSVALMLAK GNIATKVGNG TTLAAMIGKA NIFTHVGDGN TFAAMIGGAN VLTKVGNDLT
961 AALMIGKANI YSHVGNGTSI GLFAGELNVM TKVGEGTTLA AMFGKANIMT HVGDGLTGVL
1021 ALGEANIVTK VGDDFMGVVA AAKANVITHV GDATTAGILL GKGNILTKVG DGTTVGLLVS
1081 DVGNVMTHVG EGTTVGFAKG KANLITKIGD GTGVNAAWGE ANVLTQIGDG DRYNFAKGNA
1141 NMITKVGDKQ EVTVIQGDVN IITHVGNGDD YTGAWGEANV ITKVGDGRNV VLAKGKANIV
1201 TQVGQGDSFN ALWSEGNIVT KVGNGVQVIA AKGKANITTT VGDGLSVTAT QGDLNVNTKV
1261 GNGVSVNLAW GKYNVHTKVG DGLNIAVMKG KGNANIHIGD GLGINASYAR SNVAVKIGNG
1321 DFYSFSVAES NKLPSLFEHI KQTTLGVGGS QAINYLVQGD EANTSGTHKG RGAINLAEVS
1381 AIDGFQLDEI TPVSSDLNHR LNGEVTAVEL PDVSSIEGAL SQKTLSVPDQ SENLIVNGNF
1441 EQGKLGWQST NDIEAYSPAS AYGLDNTGHG ERVSQFDVDK NTVIWRELQN LSEGEVVSLS
1501 FDFMSHLEME DRDLSGNGIM VLWNGKSVFS ASGPRAIWRT QKLDLMANAG TNRIEFKGTG
1561 SDDGFSYILD KIVVKSEASL IANDDFKQRK LGWQSTNDIA AYSPASVDNT GYGERVSELD
1621 VDRNTTIYQD LQNRSEGEVI SLSFDFANRP DAYSADNGMD VFWNGKLVFS TFGDAAQWQN
1681 KTLELTAKAG SNRIEFTGTG LNDGVGYILD NVIAKSESSP QANIITKHVK QDKAAQNALS
1741 DKEKAEKDRQ LLEQEKEKQL AEIAKSQSQL ELTDQAALSQ NGLTQRNAIA AEARAETDKL
1801 VSVTQGLDVL DDYADYSGQS GDLWRNQFAS QFLSRAQDEL NYTKFITQKK LANAQRSIAD
1861 NQQQVKEAVK KSEAGVAQSE QHHARAKQDI AEAQKKAALR KEEALLQQQR AEKAENDANI
1921 SYQGAEYRGK RDIAAAENKI AQVQEDAKGA KQGDAKPDRT GAGGSGLSGK AYESTGAGET
1981 GSYIDPELIP EAEKKFYKGL TEEERQALDD AKQAIDRLQI NAGIRAENAG ILTTSKFAKV
2041 QSDNIVMPTS NSSSELVRRV PRISGINLAS LGDDPKVEQH NSAIFENAKF NLLKEGNKLF
2101 INPHVRTLGR KRQLSKALAA VRDIFYKTMS HFDEEHVLQL EQALSHWQQS SPKEFALRVS
2161 QVNLIRFRMG RMMEHLQAQR AESAGVLGIA VAPQHAEQLK QRVIFDGTGR IVGLKGSVTQ
2221 DEINQLIKWK ITPLTRKNST AEREAPKTES ESLIVFMSRL EAENIPEAGP LIERARELWL
2281 TGQVTSREII QLFNMMRSAL QAYPELHGLV LSLQADAHRE KSTTQYIDNL FGRRFDSELA
2341 HTLVKTASPD AIATSRRIGQ FLVQEFELYM QSTSDSTVRD GQIAIRMQAF AERIKKDIRP
2401 WFSRVPELTT FLQKPTFDNF KIMMTKVDNG FEMIKIPFLA VKMSITDGMG LHLSQWKAEA
2461 DIFYRDEIYK ARSTSSKLTN MADVTYKVKL TEQQTNDYGI ALPYQPSGDQ YEDFLYGRKV
2521 AAGRVLTPGQ ETMLERNALV QGHSVVTGAS GSTNIMVHLN NHIASQEPTF SQEQAYLNTL
2581 VFLVFDGGHS VNESLVVYKA LQETGDQRRQ VLQNYTASYM DLMEIAGDKG KRWINQALNS
2641 AFEKTQHLYR ENTPEREHND APVEALQALS GKNGASESVF IEDDGTPPRD KASLNPLIRF
2701 FNNELYGFKE ERRYISDETQ TILRDAVANG QSSKITLKGE EGRLTGYYHQ GDIEPGNTSA
2761 AAEKKVVLFL HGSGLSAEEQ AHDIQSHYQK QGIDILAINM RGYGGSDGSP GEQGFYQDAR
2821 TMFRYLVQDR GIKPGNIIIH GYSVGGPVAA DLARYAAQNN QAVSGLLLDR PMSSMTKALT
2881 AHDVPNPVGM IGALAKAMNG QFSVEKNLKG LPINTPIMLL TDNQGLGHVG EKLRARLSAS
2941 GYRVSGEQTF YGHGESGALM SQYADRIVST LSGSRNKHRS VVKNSLQKRG DHKTRFDSQI
3001 IIQLENDPIV AKAAINLAGK HPDSSVVVKL DADGKYHLIY GDPDSLSGKL RWQIVGHGRD
3061 ESAYNNTRLS GYSADELAIK LKQFSQSFEQ AGKPDRISIV GCSLISEDKR NGFAYRFITA
3121 LDKQGIRSDV SARRSEVAVD ATGRKFTRDK NNQWVNKLND NKLVLSWNEQ GELTTTTEKL
3181 RRGVAESDIN LARVGYTEAD SVTKGAIADN SHIFTAPGKR KNRIELGSNP QSDKPLSYAG
3241 NIQVNVGDGE FTAVNWGTSN VGIKVGTGGF KSLAFGDNNV MVHIGDGDSK HSVNLAGYQA
3301 LEGAQMFIGN RNVSFNLGRS NDLIVMMDKS IPTPPLVNPF DGAARITGVL KAIARSGEER
3361 NWLAAQDRQW TLSGAKKFVQ DMSGLDQTSS VDYKTLTELD SQHERSSRGL KSDTEAALNK
3421 KYHQWLSGHG NNTGTSKMSR ADKLRQANEE LAFNFAVGGQ GADIQVTTGS WNFMFGDHIQ
3481 SILDTNLGSL FGLMTQQYST TGMVKTTFTY TPQDLPRQLK NKLLGRLASV NAETTLADIF
3541 GVDYTPEGQI VARTGESVDG KAVLREMLEV IHKFGGDQLR AFTDPDKLID GLKQNADMSA
3601 DGVESFLVSH GLKEKAPDEN REKSVPVAID RGNIQTNNQP EHALGFNSLN LPNLFATIFS
3661 QDKQQEMKSL VTNLKQNLTA DLLNMEQKTF DFLRNSGHLQ GDSDIHVSLG NYNFNWGGDG
3721 KDLGAYLGDN NNFWGGRGDD VYYSIGTSNI FTGGEGDDLG VLMGRENWMF GGNGDDTAVV
3781 AGRINQVFMG EGNDQSFVFG EGGFIDAGNG HDYVVTSGNY NRVDTGEDQD YAVTIGNNNW
3841 VELGEGNDFG RVFGNANRID GNTGNDVIKL MGYHAVINGG EGDDHLIAAT ISKFSQFDGG
3901 DGQDLLVLGG YHNSFQGGAG VDSFVVSSKV IDNQVNDINA EDIIVFNGID WQNLWFQRSG
3961 YDLVLSVNRR TQDKTAQSLF ESVGSVTFND YFNGHRAKLV TQMDKKDSSG EREFTALSDN
4021 AVDTLIQAMS GFAPTAGDNG FIENLDSKAK AVITTAWTDT MIGKGKFA
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