LOCUS CAQ85115.1 3530 aa PRT BCT 27-FEB-2015
DEFINITION Photorhabdus asymbiotica Similar to RTX toxin RtxA protein.
ACCESSION FM162591-3022
PROTEIN_ID CAQ85115.1
SOURCE Photorhabdus asymbiotica
ORGANISM Photorhabdus asymbiotica
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Morganellaceae; Photorhabdus.
REFERENCE 1 (bases 1 to 5064808)
AUTHORS Crossman L.C.
JOURNAL Submitted (21-MAY-2008) to the INSDC. Crossman L.C., Pathogen
Sequencing Unit, The Wellcome Trust Sanger Institute, Hinxton,
Cambridge, Cambridgeshire, CB10 1SA, UNITED KINGDOM.
REFERENCE 2
AUTHORS Wilkinson P., Waterfield N.R., Crossman L., Corton C.,
Sanchez-Contreras M., Vlisidou I., Barron A., Bignell A., Clark L.,
Doggett J., Ormond D., Mayho M., Bason N., Smith F., Simmonds M.,
Arrowsmith C., Churcher C., Harris D., Thompson N.R., Quail M.,
Parkhill J., Ffrench-Constant R.H.
TITLE Comparative genomics of the emerging human pathogen Photorhabdus
asymbiotica with the insect pathogen Photorhabdus luminescens
JOURNAL BMC Genomics 10(1), 302-302(2009).
PUBMED 19583835
FEATURES Qualifiers
source /organism="Photorhabdus asymbiotica"
/isolate="ATCC43949"
/mol_type="genomic DNA"
/db_xref="taxon:291112"
protein /transl_table=11
/gene="rtxA"
/locus_tag="PAU_03027"
/old_locus_tag="PAT0973"
/note="The RTX (repeats in toxin) family of cytolytic
toxins belong to the Type I secretion system, and are
important virulence factors in Gram-negative bacteria."
/db_xref="EnsemblGenomes-Gn:PAU_03027"
/db_xref="EnsemblGenomes-Tr:CAQ85115"
/db_xref="InterPro:IPR011049"
/db_xref="InterPro:IPR011509"
/db_xref="InterPro:IPR020974"
/db_xref="InterPro:IPR038383"
/db_xref="UniProtKB/TrEMBL:B6VN12"
/inference="similar to DNA sequence:INSD:AF119150"
/inference="similar to DNA sequence:INSD:BX571870"
BEGIN
1 MGKSSNRSTE YFFTGKYYDD DDGNNIVAIG VGGEIYAKGG NDHIIVGSLG ATIYASSGDK
61 TVDGGAGYLK IVNIDGDLNV HGAAGYASID KNGNGNISFA GAAGGVSMDH RGSRGNLNFS
121 GAAAYNSLSR KGQSGDVAFK GIGGYNELWH ETNQGNLNFD AAGAGNKIDR TWYDRYEASH
181 GDVIFVGAGA ANSISSRVES GNIEFTGAGI DNHIIRKGRE GNIILHGAGA SNRIERLRES
241 KDKYEQTSGN IEFEGAGGYN QIYSDIAHGD ISFFGAGGYN EISRIGEDSD SYDKALEYAK
301 AEEIVLATAK MGANKPQQVT GIKSTIEPNT YLFAFADEKS TKISKVQLRN DPETGKLNYY
361 ATSWCKNGDQ LKNLATEYIS LENGFDDISN DDDYRLFNLI FEHHQPVIIQ HTVEEDLQEN
421 QWVTYASGTT AKAEDVTLID AKMHGRSIHS DGLILDVSAV KSNRRPNTYV YAKYVESYTK
481 VVMVELANDA KTGELKYYAS AWYKAGDHTG DLANEDFSLE NDYRSMEAGG YSLTKLQYQV
541 NTVRRISEHL EHTEEYSHQE LVQSSTNIGD SSGDVNFSGI GGGNVIKSSV INGDVNFEGD
601 GVANIILHSS RFGNTHFAGA GAANIIEKSG KDGKLTFRGA GLANVLVHQG RNGEMDVYAA
661 GAANVLVRVG DGRYLAHLLA VGNISIHQGN GDSRVMMLGG YNTHTQIGNG SANWLGAGGF
721 NVMTQTGKGS LSSVLVGGAN VLTKLSRGNL VSGMLGGANI ITHISSDNDI SNTTAIALGG
781 ANILTKKGRG DTVALMGGGA NVLTHIGSGS TTGVMLGGAN ILTKVGDDDT TGIMFGIGNV
841 LTHVGDGQTL GVMAAAGNIF TKVGDGTAIA AMIGAGNIFT HVGKGDAWAL MGGLGNVFTK
901 VGDGKALALM IAAGNVFTHI GDGMSVALML AEGNVATKVG NGMTLAAMIG EANVMTHVGN
961 GQTFAAMIGE ANILTKVGND LTIGLMVGDA NIYTHDGGGA SIGLFAGELN VMTRVGDGTT
1021 LAAMFGQANI MTHSGKGLTG VLALGEANIV TKVGDGFMGV VAAAEANVVT HVGASTTAAV
1081 LLGKGNILTK VGKGTAVGLL ISDVGNIMTH VGDGTTVGFA KGQANIITKV GEGTGINAVW
1141 GEANVLTQVG NGDRYNFAKG QANIITKVGG MREVTVVQGD ANIITHVGNG DDYTGAWGKA
1201 NIITKVGDGN NVVLAKADAN IVTQVGNGDS FNALWSEGNI VTKVGDGTQV TAAKGKANIT
1261 TTVGDGLSVT ATHGNLNVNT KVGNGVSVNA VWGEYNVNTK VGDGLNVAIM KGKGNANIHI
1321 GDGLGFNASY ARNNVAIKIG NGDFYSLSIA ESNTQSNNLP YLFKNIKQTV LNVEGSHAIN
1381 YLIHGDEANT SGVSKGRKAI NLTEVSALDG FQMDKIDEVS SDLANNLRGT ITPVETPDSE
1441 VIQNALQIGD NVGSAQDQTS PQADTVIKHA KQDKAAQNVL SDKENAEMNR QLLEQEKDKQ
1501 FKAISKSQFQ LESTNQDALN TNGQVQRDAI SEESRMVTKE LFSMTKGMDA LNNYGNYDGK
1561 SGDEWRNRFA VGYLDNTQNK LNDVKLTAQE KLADARQHFI NKRDVIKTAL EKSEAGLGKS
1621 LENIDNADED IADAKQKAEQ RKEEALLQKQ RAEKAESDAN TAYEKAKQRG ERDSTAAENK
1681 AAQAQKNAKS VKQADDAKPE RVGATGSGLS GEAYTPLAVE KSKSHIDPAS KTEADGWISE
1741 DLTLTAEDLA ALNDAQQAVN RLQLNKGIRS KNTGASVTSM FTETSSGGTV ESTLNQSREL
1801 TRKVPTISGI DLQGLGGNNP NSRSSVLKEL ELVLLNKGDK RFIDSTKRRL GAINTDRPSK
1861 ALVAVREVFN STVKQPDEQH VLQLEQALAH WQQHDPKEFA QRSKLVKSLR FEMGELVAHL
1921 QAQRAESAGI LGIAVAPEQV TQFGQEVSFD GFGRVVGLKG DIAQSEINRL IDLQIKPLTQ
1981 INSTAEREAP KTESESLIVF VSRLQQEAIP EGKPLIERAR ELWLTGQVTN EKTKELFKDA
2041 VTQLQTHPEL HTLAQQLLAD ANKQKATGQY IDNVFGRHFD SELAYELVKT ASPEAKDTAE
2101 RTGNFLVQDF EQWISRFYPE GVERDQKIAG KMQTFAKAID KDFRPWFSRV PEVTTFLDDP
2161 TFANFKTMMT KVDDGFSVIK VPFLAVKMAT TPGMGMDSAD WKRKGDIFYQ DVITKARSTS
2221 TELTTGTDVT HKVVITEKQT NDYGTALPYQ PANNKHDDFL YGRKVAAGRI LVPGRETEFE
2281 RNALAQGHSV VTGASGSTNI MVHLNNYIAS KQPNFPTGQS YLNTLAFLVF DGGHSVNESL
2341 AVYQALQATG DERQKKLNSY TANYQDLAEI AGENGKVWVN QALDNAFKET QEFYQKYAVV
2401 KPQNRPAMED LDGLSGKNKE VEPTIIDDSH LNKPVDGWQT VDVTPQIDGR ETRFEGQIIL
2461 QMEDDPIAAR AAANLAGKHP DSSVVIQLDA NGKYRVVYGD LSKLSNKLRW QVVGHGRETS
2521 EQNNIRLSGY SADELATKLK QFYQEAKLGE QAISKPEHIS LVGCSLISDD KRDGFARHFI
2581 TELDKQGIRS DVSARSSEVA VDATGRKFTR DKNNQWVNNL PDNKIVLSWD AENKLITHTE
2641 QVRRGIAESD INLSRVGHTE ADMAIKGAIA DNAEVFIKPQ RREKVNTNDS SHNQLSYSGN
2701 IQVNVGDGEF TALNWGTSNV GIKVGTGGFK SLAYGDNNVM VHIGDGDSKH SFDLDGYQAL
2761 EGAQMFIGNR NVSFNQGRSN DLIVMMDKSI PTPPLVNPFD GAARVAGVLQ GIARSGDEQD
2821 WLAAQDRQWT IAGAKKFVRD ISGLDQTSSV DYNTLIELDS QHERSSRGLK YDAELALNKK
2881 LNQWLGENDN SVDTSKISRA DKFRQANEKL AFNFAVGGRG ADIQVTAGNW NFTFGDNIQS
2941 ILDTNLGSLF GLMTQQYSTT GMASTTFTYT PQDLPRQLQN KLLGRLAGVS ADTTLGDIFG
3001 VDYTAEGKIT SRTGELVDGK AILREMLEVI SEFGGDQLEA FTNPEKLLDS LEAGINAGED
3061 GVRTFAESHG LIEKAPDENQ EQNAVGSING ESAQANSKAE RAFGFNSLNL PNLFATMFSV
3121 DKQQEMKLLV TNLKENLTAD LLNMKQKTFD FLRNSGHLQK DGDVHVSLGN YNFNWGGDGK
3181 DLGAYLGDNN NFWGGRGDDV YYSLGTSNIF AGGDGNDMGV LMGRENWMFG GKGDDTAVVA
3241 GRINRVFMGE GNDQMFVFGE GGFIGAGNGQ DYVVTSGNYN RVDTGADQDY AVTIGNNNRV
3301 DLGEGNDFAR VFGNENRIDG HSGNDTIKLM GYHAVINGGD GDDHLIAAAI SKFSQFDGGD
3361 GQDLLVLGGY QNSFQGGAGV DSFVISGEVI DNQVNDINAE DMILFNGVDW KNLWFQRSGY
3421 DLVLSVNRHT QDNSVYTAQG LFESVGTVTF NDYFNGHRAK LVTQMGDKDK SGEREFTALS
3481 DNAVDSLVQA MSSFSPAAGD NGFIGSLDSK ARMAVTTAWT DVTIGKGKFA
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