LOCUS CAQ83311.1 114 aa PRT BCT 27-FEB-2015
DEFINITION Photorhabdus asymbiotica similar to pyocin s2 and s1 and
colicin-e9 protein.
ACCESSION FM162591-1218
PROTEIN_ID CAQ83311.1
SOURCE Photorhabdus asymbiotica
ORGANISM Photorhabdus asymbiotica
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Morganellaceae; Photorhabdus.
REFERENCE 1 (bases 1 to 5064808)
AUTHORS Crossman L.C.
JOURNAL Submitted (21-MAY-2008) to the INSDC. Crossman L.C., Pathogen
Sequencing Unit, The Wellcome Trust Sanger Institute, Hinxton,
Cambridge, Cambridgeshire, CB10 1SA, UNITED KINGDOM.
REFERENCE 2
AUTHORS Wilkinson P., Waterfield N.R., Crossman L., Corton C.,
Sanchez-Contreras M., Vlisidou I., Barron A., Bignell A., Clark L.,
Doggett J., Ormond D., Mayho M., Bason N., Smith F., Simmonds M.,
Arrowsmith C., Churcher C., Harris D., Thompson N.R., Quail M.,
Parkhill J., Ffrench-Constant R.H.
TITLE Comparative genomics of the emerging human pathogen Photorhabdus
asymbiotica with the insect pathogen Photorhabdus luminescens
JOURNAL BMC Genomics 10(1), 302-302(2009).
PUBMED 19583835
FEATURES Qualifiers
source /organism="Photorhabdus asymbiotica"
/isolate="ATCC43949"
/mol_type="genomic DNA"
/db_xref="taxon:291112"
protein /transl_table=11
/gene="col"
/locus_tag="PAU_01219"
/old_locus_tag="PAT4265"
/EC_number="3.1.-.-"
/note="Bacteriocins are protein antibiotics that kill
bacteria closely related to the producing species.
Colicins are a subgroup of bacteriocins that are produced
by and target . The lethal action of most colicins is
exerted either by formation of a pore in the cytoplasmic
membrane of the target cell, or by an enzymatic nuclease
digestion mechanism. Most colicins are able to translocate
the outer membrane by a two-receptor system, where one
receptor is used for the initial binding and the second
for translocation. The initial binding is to cell surface
receptors such as the porins OmpF, FepA, BtuB, Cir and
FhuA; colicins have been classified according which
receptors they bind to. The presence of specific
periplasmic proteins, such as TolA, TolB, TolC, or TonB,
are required for translocation across the membrane"
/db_xref="EnsemblGenomes-Gn:PAU_01219"
/db_xref="EnsemblGenomes-Tr:CAQ83311"
/db_xref="GOA:B6VKC3"
/db_xref="InterPro:IPR003060"
/db_xref="InterPro:IPR003615"
/db_xref="InterPro:IPR037146"
/db_xref="UniProtKB/TrEMBL:B6VKC3"
/inference="similar to DNA sequence:INSD:BX571865"
/inference="similar to DNA sequence:INSD:X12591"
BEGIN
1 MGAPIPSQIA DKLRGRRFNS FDDFRKVFWK EVGSDPELSK QFTRANAVNV PKGYSPYTIP
61 EEQAGGREVF EIHHVKSINE GGEVYNMDNL RILTPKRHIK IHANKGEKWD EFKK
//