LOCUS BEK99572.1 327 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae 23S rRNA (guanosine(2251)-2'-O)- methyltransferase
RlmB protein.
ACCESSION AP028459-7478
PROTEIN_ID BEK99572.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="rlmB"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_005065566.1"
/locus_tag="NSER024013_74780"
/transl_table=11
BEGIN
1 MAGNSQRRGA TRKSGSKKGQ TVGSGGQRRR GLEGKGATPK AEDRVYHVAA KRAKAKAKAE
61 ASAATTRSRN ASRPIAGRKD NEGPELVLGR NPVVECLRAG VPATALYVAN GTENDDRLSE
121 AVKTAAEIGI SILEVPRTDL DKMSHNAMHQ GMALQVPPYK YAHPDDLVDR VHNSGEPALI
181 VALDNITDPR NLGAVIRSVA AFGGQGVVIP QRRSASVTAV AWRTSAGAAA RLPVARATNL
241 TRTLKDWANK GYQIVGLDAG GDTTLDEFDG SAPTVIVVGS EGKGLSRLVR ETCDSILSIP
301 MAGPVESLNA SVAAGVVLAE VARQRRI
//