LOCUS BEK99550.1 852 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae ATP-dependent protease ATP-binding subunit
ClpC protein.
ACCESSION AP028459-7456
PROTEIN_ID BEK99550.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="clpC1"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_011731031.1"
/locus_tag="NSER024013_74560"
/transl_table=11
BEGIN
1 MFERFTDRAR RVVVLAQEEA RMLNHNYIGT EHILLGLIHE GEGVAAKSLE SLGISLEGVR
61 SQVEEIIGQG QQAPSGHIPF TPRAKKVLEL SLREALQLGH NYIGTEHILL GLIREGEGVA
121 AQVLVKLGAD LNRVRQQVIQ LLSGYQGKEP VEGSGQRGET GTPSTSLVLD QFGRNLTQAA
181 LEGKLDPVIG RSKEIERVMQ VLSRRTKNNP VLIGEPGVGK TAVVEGLAQA IVNGEVPETL
241 KDKQLYTLDL GSLVAGSRYR GDFEERLKKV LKEINTRGDI ILFIDELHTL VGAGAAEGAI
301 DAASILKPKL ARGELQTIGA TTLDEYRKYI EKDAALERRF QPVQVGEPTV EHTINILKGL
361 RDRYEAHHRV SITDGALVAA ATLADRYIND RFLPDKAIDL IDEAGARMRI RRMTAPPDLR
421 EFDDKIAEAR REKESAIDAQ DFEKAARLRD KEKQLVAKRA EREKQWRSGD LDVVAEVDDE
481 QIAEVLANWT GIPVFKLTEE ETTRLLRMED ELHKRIIGQE DAVKAVSKAI RRTRAGLKDP
541 KRPSGSFIFA GPSGVGKTEL SKALANFLFG EDDALIQIDM GEFHDRFTAS RLFGAPPGYV
601 GYEEGGQLTE KVRRKPFSVV LFDEIEKAHQ EIYNTLLQVL EDGRLTDGQG RTVDFKNTVL
661 IFTSNLGTSD ISKAVGLGFA QSNVEGSNYE RMKLKVNDEL KKHFRPEFLN RIDDVIVFHQ
721 LTQDQIIQMV DLMIGRVAKQ LKNKDMEIEL APQAKSLLAK RGFDPVLGAR PLRRTIQREI
781 EDQLSEKILF GELGAGQVVV VDVEGWDGEG QGENAKFTFT AKAKLTKKSD DAAEDKPVAA
841 LAGDAPAAAS GE
//