LOCUS       BEK98949.1              1172 aa    PRT              BCT 26-JUL-2023
DEFINITION  Nocardia seriolae transcription-repair coupling factor protein.
ACCESSION   AP028459-6855
PROTEIN_ID  BEK98949.1
SOURCE      Nocardia seriolae
  ORGANISM  Nocardia seriolae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE   1  (bases 1 to 8113213)
  AUTHORS   Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2023)
            Contact:Kousuke Umeda
            Fisheries Technology Institute, Japan Fisheries Research and
            Education Agency, Aquaculture Research Department; 422-1
            Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE   2
  AUTHORS   Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
  TITLE     Complete genome sequences of alpha-glucosidase-positive/negative
            strains of Nocardia seriolae from Seriola species in Japan.
  JOURNAL   Unpublished
COMMENT     Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Unicycler v. 0.5.0
            Genome Coverage       :: 220x
            Sequencing Technology :: BGI DNBseq; Nanopore MinION
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /collection_date="2002-10-24"
                     /db_xref="taxon:37332"
                     /geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
                     /host="Seriola quinqueradiata"
                     /isolation_source="muscle isolate from a diseased fish in
                     a fish farm"
                     /lat_lon="33.10 N 131.89 E"
                     /mol_type="genomic DNA"
                     /organism="Nocardia seriolae"
                     /strain="024013"
     protein         /gene="mfd"
                     /inference="COORDINATES:ab initio
                     prediction:MetaGeneAnnotator"
                     /inference="similar to AA sequence:RefSeq:WP_011730525.1"
                     /locus_tag="NSER024013_68550"
                     /transl_table=11
BEGIN
        1 MLVAPSAVRP FVASTIAGQR PLLVVTATGR EADDLTVELT EILGDTVALF PSWETLPHER
       61 LSPGADTVGR RLQVLRRLAH PDDPGSTGPL RVVVTTVRSL MQPMAAGLGD IEPVVLRPGA
      121 EFDFDELLTR LVEFAYERVD MVGKRGEFAV RGGILDLFPP TADHPVRVEF WGDEVSELRA
      181 FSVQDQRSIH EVPIDLVVAP PCRELLLTTA LRERAAQVAA ENAADAALVE MLEKISEGIP
      241 VEGMEALLPV LQPGELQLLV DVLPAETHVL LCDPEKVRTR AADLVRTGEE FLEASWTAAS
      301 FGGAAPLGAH GLDLAASGYR GLDVVHADAE RRGLPWWTLS PLAADHPDEI ALPVLAAASA
      361 RGSEELVATI FASLRAHVAT GGRAAIVVAG HGTAQRILER LADAEVPATA LEAGAEPQPG
      421 VVAVLCGSLH DGVVFDESKL VVIAESDLTG NRVTAPGEGK KLPAKRRNQV DPLALTAGDM
      481 VVHDQHGIGR FVEMIERTIA GARREYLVIE YAPGKRGQPG DRLFVPMDSL DQLSRYVGGE
      541 MPSLSKLGGS DWANTKRKAR KAVREIATEL VQLYAARQAA PGHAFAPDTP WQQEMEDAFA
      601 FTETVDQLSA IAEVKSDMEK AVPMDRVICG DVGYGKTEIA VRAAFKAVQD GKQVAVLVPT
      661 TLLAQQHLQT FTERMAGFPV VVKGLSRFTD PAESREILEG MTSKDVDIVV GTHRLLQTGV
      721 RWKDLGLVII DEEQRFGVEH KEHIKALRTH VDVLTMSATP IPRTLEMSLA GIREMSTILT
      781 PPEERHPVLT YVGAYNDKQV AAAVRRELLR DGQVFYVHNR VASIDKAAKR IRDLVPEARV
      841 VVAHGQMNED MLEKTVQGFW EREFDVLVCT TIIETGLDIS NANTLIVERA DSLGLSQLHQ
      901 LRGRVGRSRE RGYAYFLYPP EKPLTETAYD RLATISQNSD LGAGMAVAMK DLEIRGAGNV
      961 LGAEQSGHVA GVGFDLYVRL VGEAVEAYRA AADGRPITVD EEVKEVRIDL PVDAHIPPDY
     1021 IASDRLRLEG YRKLAAAQDD SALSAVVEEL VDRYGPLPVE VGRLVSVAKL RLLAREYAIA
     1081 EIGVTGTTLK VSPLQLPDSK QMRLKRLYPN ATYRAATGIV QLPLPRVEDS VGAARVRDVQ
     1141 VLQFVADLLL ALDGKAPGAV DVKVAAEVLA PR
//