LOCUS BEK98226.1 401 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae L,D-transpeptidase LdtMt2 protein.
ACCESSION AP028459-6132
PROTEIN_ID BEK98226.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="ldtMt2"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003412938.1"
/locus_tag="NSER024013_61320"
/transl_table=11
BEGIN
1 MSDVKVRRYR RVLGVGAVVS VLALALLGCS SGGKHQSSTV AIDSNPIGEL MKPKVISPIK
61 DGDKGVSPGE LTLKVEDGKF TNVVLTNPDG KAVPGELAKD GSTWKLAEQL GFGRTYKLSI
121 DAIGLGGASN STMSFTTISP NNRTHPYLLP AENDVVGIGQ PVAVQFDENI PDRKAAQNAI
181 KITTTPAVEG AFYWVNNREV RWRPQNFWAP GTKVDIAVST YGHDLGSGLV GDSDIRSSFT
241 VGDATIFTAD DNTKIVTVER NGQVIKTMPT SMGKDSTPTD NGVYIVGDKF DRIIMDSSTY
301 GVPVNSPNGY KTPIDWATRI SYSGIFFHSA PWSVGAQGSV NTSHGCLNLS PSDAKWVYDN
361 VKRGDITIVK NTVGGTLSGV DGLGDWNIPW EQWKAGNADR S
//