LOCUS BEK98076.1 429 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae sigma factor-like helix-turn-helix DNA-
binding protein protein.
ACCESSION AP028459-5982
PROTEIN_ID BEK98076.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_013229204.1"
/locus_tag="NSER024013_59820"
/transl_table=11
BEGIN
1 MMSDTALEDL LRDLAPQVLG ALVRRYGDFD AAEDALQEAL LAAATHWPTD GLPDNPRGWL
61 ISVGQRRMID AIRAESSRRN RETANAIRDP ERLGGATPDP ADAIIAGRDS VAPGPDRDDT
121 LTLFFLCCHP VLSPASAIAL TLRAVGGLTT EEIARAFLLP ERTMAQRITR AKKRLAEESR
181 PFALPTEPNG QRGEWNDRLD SVLRVLYLIY TEGHTSGGER LHRGDLASEA IRLTRALFRA
241 IPDNPEVTGL LALLLLTDAR RAARTGSHGE LIPLEEQDRS LWDRDLIIEG VRLATAAVHS
301 GLIGQYQIQA AIAALHAQAL RPENTDWPRI LLLYNALERH SPNPMVTLNR AVALAMVHGP
361 QAGLDLTDTL RDSLSGNHRL ESVRAHLHEM AGDPEEAITA YTTAARQTTS LPERNYLTLR
421 AAHLRHLMR
//