LOCUS BEK97806.1 339 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae sigma-70 family RNA polymerase sigma
factor protein.
ACCESSION AP028459-5712
PROTEIN_ID BEK97806.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_037062758.1"
/locus_tag="NSER024013_57120"
/transl_table=11
BEGIN
1 MSDISFTEVP DEVAVARAGD DAAFTRLIAP MRRELHAHCY RMLGSTHDAE DALQDALLRA
61 WRGFAGYEGR SSLRRWLYAV ATNTCLDLIA RRAKRALPMD LGPASEHAVL DNEPRIEVPW
121 LSPYPDTGLA YEQREAVELA FVAALQHLPG NQRAALLLFD VLGYTAAEIA EVMDTSVTSV
181 NSALARARKL MADKTREQTQ QQTLRALGDA RLRELVTAYA TAFERRDAPA LIALVTEDVT
241 WSMPPLPHWY RGRAAALDFA TQIPMGTCPA WRHLHTTANG QPAVALYLWH AATHTYRPWA
301 ISVLTLRGNQ IAAITSFIGP TLFPDFNLPD HLPEGLEHP
//