LOCUS BEK97682.1 5444 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae hypothetical protein protein.
ACCESSION AP028459-5588
PROTEIN_ID BEK97682.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023) to the DDBJ/EMBL/GenBank databases.
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished (2023)
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NSER024013_55880"
/note="frameshifted, insertion/deletion at around
5789185,5789091,5789060,5790439,5784463,5784369"
/transl_table=11
BEGIN
1 MPLSESQYIE MRGPLDLEAL RGAATTAARE FGSGVLRLVE IDGRPYQLID PGKAPTLGFL
61 DFADRPDPMA EALAWMRAEV AAPIDLLGEN AGVTTVIRVG ESHHLWYTRA HHILIDGFGS
121 MTMLYRVAEL YNAAVHGQTA PPGTAASLAE VHEAEMAYRE SSRFAADAAY WREVTADMPE
181 RCSLVAATAP AAALAREAWE QLPEATSALL ESAARRLDSS VAGVVMAAVA LYYGRITATE
241 DVVLSLPVSG RTTAVLRRSG GMIANVVPLR VPVPRTGRVG VVLAAIRVAA SGALRHQRFR
301 HEDMRDEQGD GAGELTRGIV GPVINIMMFS AGIDFAGLEC GLNVVTSGPI EDLFVNFYQH
361 GADAPIHVDF AANPRLYDED SLRSHHRRFL ALLDSLLDAD AETPVTALRY ATAEDGSVLG
421 GAHGAPAPEP RLLPEILESG LRSAGPDAVA IVAGDRELTY RALDALSNRL ARRIIAAADD
481 KPVGPESAVL LHLPRSIEAM VALWAVAKTG AAFVPLGTAM PADRMARIAA ECDAGIGLTL
541 RRTGGELPDT VRWIALDDLL DRAAGSDGES WSTAQLTPGE LPGRPRLENP AYIVFTSGST
601 GVPKGVVVTH AGLAGLAAAI VDAYRVAPGA RVLQCLNPSF DAAVLEWLMA FASGTTLVVA
661 EPDPVLGAEL AALVREHRIT QVCSTPAVLS TLDAHALDGV RAVSSGGEPT PPDIVARFGI
721 GRDLLNSYGP SETTVAVTYT KGLVPGENAG LGEPIRGAGM LVLDRWLRPV PVGVAGELYV
781 TGPGVARGYV GRAALTAERF VPALSGPAGS RMYRTGDLVR WTRAPGASGS SHVLEYVGRS
841 DFQVKLRGMR IELGEIDSAL NAHPAVEIAV TVARQTSGGN SVLAAYVVPR AEASLTESEL
901 LEHASHRLPP YMVPATVTVL GALPLTANGK VDRRALPEPV LAQPVHRAAA GAAERLLCDL
961 YAEILGGAQV GPETSFFALG GDSIMAITLV SRARESGLVF SAREVFEHRT PAALAVVASR
1021 VADRPARLAE LPGGGIGSMP LTPVAAWLLE RPGWERFAQS MVVRLPGGVE AGARTRSVQA
1081 LVDRHDMLRA RVIETGPVLE VGEHADAGAL LTRIDCPAGG IGDALIAREL DAAVGRLRPR
1141 AGVMIAFTWL DAGPVTQGRL LIAVHHLACD AVSWRILLPD LLSAWTQVAA GTDPELRETG
1201 TSMRTWAHAL SGLAESDADR WPVSELGYWQ HTLAPDPLVG ARRLDPVPDT HGTAGRLEVE
1261 VPGEVSAALV GRITAAYRCG VEDALLAALA LALALARWRG DRETATVVAV ERHGREEAAV
1321 PGADLSRTVG WFTAQVPVRI GPVAPQADPS DTRAAAVALK TVKEQLRAVP RGGIGFGLLR
1381 HSNPATAREL AGLPEPQVGF NYLGQIPDGV GEADWLPESM ADRLGGHAHP DMPLAAVLAV
1441 DAVTLESADG QRIRAIWQFA PGAIDGVAVE ALAREWVSAV SAIAALADDP AAGGFTPSDL
1501 DLLSVGQADI DGWERRYGRL DDVLPLTPLQ RGLLFQSQLA AGGADGYSVQ AVIDVEADLD
1561 FPRLTAAVEA LVQRHDVLRT GFVQSGDGAV QVIAAHADVS CVYHDAPDAT PAALDELAAA
1621 QLRIPFAVDT PPLLRVLCIG MGDRRIRLVI TNHHLILDGW SMPLLFAELI ALYEKAGDTA
1681 GFDTPVPFRR YLEWISERDA ERARAAWSQA LDGLDGPTLV APGAPRADAA AAPVAHDVPL
1741 PDGLVERLRA TAAESQVTVN TIVQVAWAMT LAGLTGSADI VFGATVSGRP PELPGPERMV
1801 GMLVNTVPVR IHLNPAEPIT GLLARVQREQ AALAEHQFLG LDEIHARTGL GPLFDTATVF
1861 ESYPVDAASL TAATRQAQLA VTGIVGHDGT HYPLSLAAYA DTGLRLELTR SPRYFDAAQA
1921 DSIARAMSRL LVAIVSHPER RTAAVTDADP LNTAAIRRGA PAVAVRLLPD LLTAAGTAQR
1981 VAVGTPAQPA VRRGDVAASH RNPFLAADLT YAELDDLSNR LARRLIENGA GPERAVLVVL
2041 PRSVEAMVAI WAVAKTGAAF VPVDSAQPAA RTAVMASECG ATLGITVTAP DIELPSEVDW
2101 LRLNDPIVAG RLAGLSGAAL TDADRLAPLR PGQAAYVVFT SGSTGTPKGV VVTHAGLASM
2161 VAATVERIRI DRDSRVMHCL HPAFDAAILV WLSTFAAGGT LVLAPPTANA GAELGAALTE
2221 SAATHLICTP SVLATVDTED LATVRAIATG GEACTPALVT RVGADRLLVN SYGPAETTIA
2281 TSYGDPMTTD TATVIGNPIA GVAMLVLDHW LRPVPLGAVG ELYLSGPALA RGYAARTAAT
2341 AARFVADPYA AGARMYRTGD LIRCTAAGFE YVGRTDFQVK IRGIRVEPGE VDAALLTHPM
2401 VAAAVTVAHR GQTGAMMLAS YVSLAPGAAV SADDLSAWLA GRLPRYLVPA GIQVLDELPR
2461 TAGGKVDPRA LPEPQVAQAE YVEPVGDEAI VAEIYADVLG LERIGARDDF FALGGDSLIA
2521 TRVVARLSAA LHRTVPVRTL FEAPVVAELA RRVRAAESAA EGPALVRGPR PEPVPLSPAQ
2581 QRMWFVNRFD PGSPAYNVPV ALRLSGHLDT AALRAAVYDV IDRHETLRTV YPDLDGVGVQ
2641 RIRAVDEIAL DLEPVVIPAD RLPETVIRTV TQGFDVTAAV PLRLNVFRIE GTEDEHVVVL
2701 VAHHIATDGF SMAPLTRDLA AAYATRAAGQ TPAWEPLPVQ YADYSLWQLD RLGAEDDPES
2761 LLARQVRYWS QHLAELPDHL ELPTDRPRPA RASYRAAEWT TRVDGDLTAA IERCARAHRA
2821 TPFMVVHAAF AVLLARLGGG PDIAVGTPVA GRGRRELDDL VGMFVNTLVL RTGIRLGESF
2881 ADLLERVRDI DLAAFEHADM PFERLVDVLA PARSQARHPI VQVMLVYQNL VIPELRLPEL
2941 TVAPLEMPQT TSRFDLMLTL RDAGDDGMSA VFTYARDLFD ESTVTAFGAR LLRLLERIIA
3001 DPSAPVGDLE LLAAGERAAL LDRTGGPAVR PGTLPELLAA AVAANPDGPA VTFAGRALTY
3061 TELDAASSRL ARELIARGAG PDVRVAMAVP RSIESVLAVW AITKSGAGLV PVDPNYPADR
3121 IEHMVTDSGA LFGVALGAAA PTLPALPGQW LPLDDPYLLR DLEKHSAAPI SDADRRAPLR
3181 PGNIAYITYT SGSTGVPKGV LVTHAGLANY SRAQLDRLRL DSSSRTLHFA SPSFDGAMLE
3241 LLQAVGPAAT MVIVEPGIIG GEELAEVIRG ERVTHAFLTT AAAATMETTG LDELRVLSAG
3301 GEAMPADLVA KWTAPAPDGS VRALHNVYGP TETTIVTNMS PPLVAGDPLV IGAPIRGVRA
3361 LVLDPRLRPV PEGVVGELYL SGIQLARGYH ARPGLTAERF VANPHEPSGE RMYRTGDLVR
3421 WRPDATGHPA IEYLGRNDFQ VKVRGFRIEL GEIDAALVAH ESVEFAVTVG YRRSGTAEST
3481 AVVSYVLAAP GHDIDTAELT EFVAERLPEY MVPMAITVLD ELPLTPVGKL DRRALPEPVF
3541 GAREFRAPRG ELETLVAEVF AEVLGAERVG ADDHFFTLGG NSLLATQVTA RLGAALDTRV
3601 PVRALFDAPT VTALTAALAT GVSAARPRLE ARPRPERIPL SAAQLRMWFL NRLEPESPAY
3661 NIPGAFNIEG ALDITALRAA IDDVVARHET LRTIYPVDPD GQPYQRILPA TPGSTPVTEI
3721 AAAADEVAGV LASQLSHGFD VGRETPLRVC VVHVAPEHTV LAWAVHHIAA GGWSMTPMAR
3781 DIVTAYVSRA ADTAPQWSPL PLQYTDYALW QRELLGADDD PDALAHRQLD FWRTALAGLP
3841 EVHGLPTDRP RPPRPSGRGD DVEFTIPAEV HERLQALGRA HGASPFMVVH TALAILLARL
3901 SGETDIAIGS VVAGRGEGEL DDLVGMFVNT VVLRTQLDPD AVFAAALDTV RQSDLAVYEH
3961 MELPFERLVD ALSPERSTAH HPLFQVLLAF QNLRTPRTTL PGLAISPVEA PAPGSKFDLE
4021 WVLAEEFGAE GEPAGITGKL VYATDLFDRS TVATLADRFV RVLTAATADP AARVSDIDLL
4081 DAAERRVLVP ARGPSGSGTT GTLVRILTAT AAAHPDRPAI VAAGRTIGYR DLDLASDALA
4141 ARLATAGATV ETVVALALPR GAELLTAVWA VAKTGAAFLP VDPRNPLDRI DHMLSDSGAV
4201 LGLTSDEHRS ALPDSAEWMT LNGAARPGTG DRPMPTAVHP DHPAWLIYTS GSTGTPKGVT
4261 VSHRGLANLV TSLRHTFGVD QSSRVLLVAS PSFDASMHEA LMAFGVGGAA VVAPPEVFAG
4321 DALANLIASE QVTHLAMTPT ALATMDPAAV PTLRTLGVGG EAIGSELAQR WSADRTLINV
4381 YGPTEFTIWA TASEPLTAEV PITIGGPIHG AAVLVLDERL RPVPMGVAGE LYLAGPALAR
4441 GYHARPGLTA ARFVADPYGS AGERMYRTGD LVRWIGEPAS PRLEYLGRSD FQVKIRGQRI
4501 ELGEIDAVLS RAEGVESAVT LGVPGPGGAT ALAAYVQPAP DAAVDLAALR AHAAAGLPGY
4561 MVPSAFVLLD AMPLNAVGKL DRKALPQPVF EAETEYRPPT TPTEIALAGI VAELLGRERV
4621 GVHDSFFALG GDSILAIQLV SRARPHGIEL SPMQVFEHRT VAALSALADN AGETVVLEEL
4681 DGGGTGELPL TPVVRWMTER GGDFGRFAQS AVLELPSGIT RERIVATVTA AVTRHDMLRA
4741 RLTNEDGDWR LRTREPGEVD VDALLHRVEF DENEVAGQRE RAAAELDSAL DRLDPANGTV
4801 LQLIWLDPED AAVRRNGLLI LVAHHLVIDG VSWRILIPDL IAAWAQIAQG ATPALPETGT
4861 SMRRWAHALR EAAHSDTRTA ELDYWRRLTD EPDPLIGDRE LDPAVDRTAT ARAIDVTAPA
4921 EVTDALLTTL PALFDGSVED ALLAALALAV LRWRTARSAA PGPASVLVRM EGHGRQQEIV
4981 PGADLSRTVG WFTSMYPMRV DLSGIDVGEA LAGGPAMGAA ILAAKHQRLA LPDKGIGYSL
5041 LRYLNEDTAR QLPHRVPGRI GFNYLGRYAD ADRPAGLAGL GWLPAEEFGE LHAPEHPEVP
5101 IAAEIEINAV VVSGHLRANI GYAGLLLARE EVAELARLWI EVLTAAADFA ETPAARAAAE
5161 AEAREQARQA EIAALTAGLA DRPVGLGLDV VFPIRTAGDG PAVFCVHPAS GIAWSYLGLG
5221 ELLAPGRPVY GLQAPDLSGE APVGSMDDFV ERYLREIRRL QPEGPYHLIG WSFGGLIAHA
5281 LAARLQAEGA QIGTLALLDA DSGDTDADSH EQLTAVSLVE ALGPVLGITD IPPESTAEDV
5341 VELIRARMGC VSLVDAATLE HMAASYNSSG RARTGYRRPV FHGDALYFSA TVDSAEVFGP
5401 AGWRPFITGD INNHDIEVTH NEMTTPHALA IIARVLDENL GTPR
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