LOCUS BEK97394.1 476 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae hypothetical protein protein.
ACCESSION AP028459-5300
PROTEIN_ID BEK97394.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/locus_tag="NSER024013_53000"
/note="frameshifted, insertion/deletion at around
5472594,5472523,5472575"
/note="possible pseudo due to internal stop codon"
/transl_table=11
BEGIN
1 MDQTHLGQWV SDEEFRLSRE LGNIALFFEL NLDEDEIRRV QEVYGQVAGR LGPHQRARTM
61 IQQYPALTLV SLLGHAGLSY EQGRFWDGFW SELGLPREQE FENALRAALG RLLRRFGMRE
121 FPELQGDYVR VMTMHAGIPV HCLGDLVDVI EHHLAVGREP TGAAVFEWLT EPGMAYRLNS
181 LDVPVRNFLQ LGGEAAVDII DRILDFIEFT AEHTDVWNDL TVDSSTTGLP TLLLEGLIDR
241 LRERPFGQGP AAVGAAARGH VPLLGFSEAD RQITVGLPYP ASEPEQPWKV SFDGDTRERY
301 AERGWGVVDG AAHPLTPVPV IRPVREVVLR HAGSAAEHRI PLVDKSDPLL LFDLEGMLLH
361 RRSALPRDEV FAVHPHDAVI VDAASGEPVA SSENLGSPAG WRGWQARTVD LSGRDAIRLQ
421 RNGGDLCPTR EVRAVGAPRL ELAYPLEGVS TTSGLSVYPT RPIITLPPCP RPGSQI
//