LOCUS BEK97392.1 1645 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae DEAD/DEAH box helicase protein.
ACCESSION AP028459-5298
PROTEIN_ID BEK97392.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_011727541.1"
/locus_tag="NSER024013_52980"
/transl_table=11
BEGIN
1 MTERLDPLAA GADIEASYKR YLKTLLAPRD PMLAAVFDRA VDDTAMLTKG PLLELTPPYA
61 PGMSLRQLMT EGVLHAGLAD LGTAIDLDRP LYRHQETAVR KAVAGRNLVV STGTGSGKTE
121 SFLLPIFNSL IAERAAGDLG PGVRALLLYP MNALANDQLK RLRGLLADLP DITFGRYTGE
181 TKESAADAES QFQALHPGAA RLPNELLSRQ EMRETPPHIL LTNYTMLEYL LLRPADVDLF
241 DGEYAGTWRF LALDEAHVYD GAQGSEVALL LRRLRERVAR DSRLQCIATS ASLTGTTEES
301 QGGEATSFAT RLFDAPFEFV PGDEDRQDLV TATRSPRRDT PTWTVDDTEL LGFADATADL
361 SPIGKHCRSG DIADALHDER RIADLKAIVS GGPVDVRTLA TKLWPGDAHA LAKLEALVAL
421 GSKVHDADGN PVLSARYHMF VRATEGAYVS FGGDEPRVFL GRHEIDPETG RAVFEFGTCQ
481 RCGAVHLAGR VDNRNGREFF LPAKTEDAES VRWLVLTEGT LDSLLDEDEE TLSDDAGAGI
541 STGVRQLCTG CGALDRGTGR CSGGGCPGGP VLRVREHPMR TRVMSTCTEC GARSRQVIRR
601 LRTDVNAAPA VITTALYQHL PAATDETAEQ VGAGRKLLMF SDSRQAAAFA APYLAHTYGR
661 MLERRYLTQA LLDPGNRGEL LSVADLAATV RAIATAAGHF AERATRGEIL REVNPWIMAE
721 LMTLDQRQSL EGLGLMRVSL FRAGPAPKPL TRLGLSEVEA WGLLEELIRT VRYQGAMTLL
781 PDVDIREPIF EPRNLRIRVR SMKSDRGRAI ISWLPGGGVA TTNNRILLVR KVLAAVGSEL
841 DARDVLNGCW RFLLDLGCLS LERDKVAGDV YQVDHAELRI QPGPDCAWYQ CESCRRLTPN
901 SIRGLCPQGA CDGKLVEFAL PPLDSDTNHY RTMYRTLQPA PMSAQEHTAQ WAAIEAADIQ
961 RRFIAGEVNV LSCSTTFELG VDVGDLQSVV LRNMPPKTAN YVQRAGRAGR RASSAALVLT
1021 YAKRGSHDLS KFQKPESMIA GAMRIPWIPI DNERIGRRHA HSIALAAYFR SRFERDRLVW
1081 TKAGPFFEPG SEGQDSAAAQ VRQFLTPVPD HVRTALRTVL PPSVSSAIGV DDGSWVDRLC
1141 ELLALAEADL IGDIELFSAL IEDAVQTRKF TLAGRLQKTL RTIEDRQLIG FLANKNILPK
1201 YGFPVDTVEL RTTHCEGDVG GKLELDRDLS QAIFDYAPGN EIVAGGKVWT SRGLHKLPKR
1261 ELEALAYRVC RECSRFECGH GLDAAARCPS CDQEFGQIRT CVVPECGFVA DRRVGEVKAE
1321 PPQRLWGGSS YVEHIGDVTE TFEWQSTGGV AVQARAGTRA RMAVLAEGKG GGFHLCEWCG
1381 WATVVEGKRA HRAGHERPAT GTPCSGPLQR VSLAHRYETD VAEFTFEDMS YDKDSESKWL
1441 SVLYALLEGA SEALEISRDD IDGTLSWSAD GRRSIVLFDT VPAGAGAAKK IAEHLEQVVH
1501 HAVVRVTVCD CGPETSCYGC LRSFRNDRFH ERLSRAGALE IFDRLRVVGA ADDLAGPWGE
1561 NPLGLSRAVI ELLSELSRRG ITKPDIGVEA GTHYWPVEAV WGDARVTLVE GADADRDNGL
1621 REDGYQVVTV EETDADRLAA VLAES
//