LOCUS BEK97265.1 334 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae peptidoglycan hydrolase RipC protein.
ACCESSION AP028459-5171
PROTEIN_ID BEK97265.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /gene="ripC"
/inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_003411373.1"
/locus_tag="NSER024013_51710"
/transl_table=11
BEGIN
1 MIGSYGTLGI GPATADPVSA PASAGEAVQR LIDLSRQSEQ LNQQALNAQA DLDTKLAAAN
61 AADQKAGAAA AALDAAKAEI ARYRPVIDRA ATSALLGSRT NRLTSLLVSN SPQQLLDQMS
121 IVDFVGARTN DQLGQYEKAT DAAAAADGAA RTAAEAARAA SAAADTVRSD LESKRAALQG
181 SMAGVIAAWG QLSAGDKSAL AGSMFPPGFD RDSMLRGLVP GSGTSALAAG LTRVGDPYVW
241 GATGPDQFDC SGLVQWAFHQ VGKNVPRTSQ QQSGFGTPVD EKDLQPGDVV FFYSDISHVG
301 IYAGNGLMLH ASTFGIPVQV APMGSTPFHS ARRF
//