LOCUS BEK97197.1 308 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae RluA family pseudouridine synthase protein.
ACCESSION AP028459-5103
PROTEIN_ID BEK97197.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_005057888.1"
/locus_tag="NSER024013_51030"
/transl_table=11
BEGIN
1 MRETRSMPVP DGLDGMRVDA GLSRLLGLSR TAVASMAEEG AVQLDGVAAG KSDRLTAGAW
61 LEVEFPEPKR ELTVEATPVE GMKILYADDD IVAVDKPVGV AAHTGVGWTG PTVVGGLAAM
121 GYRISTSGAH ERQGIVHRLD VGTSGVMVVA QSEHAYTQLK RAFKYRTVEK RYHALVHGHP
181 DPSSGTIDAP IGRARGNDWK FAVTADGRPS VTHYDTVEAF QSASLLDIHL ETGRTHQIRV
241 HFSAVRHPCC GDLTYGADPR LAERLGLERQ WLHARQLGFN HPADGRWVEI TSEYPADLEH
301 ALDVLRAH
//