LOCUS BEK97191.1 420 aa PRT BCT 26-JUL-2023
DEFINITION Nocardia seriolae IS4 family transposase protein.
ACCESSION AP028459-5097
PROTEIN_ID BEK97191.1
SOURCE Nocardia seriolae
ORGANISM Nocardia seriolae
Bacteria; Bacillati; Actinomycetota; Actinomycetes;
Mycobacteriales; Nocardiaceae; Nocardia.
REFERENCE 1 (bases 1 to 8113213)
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2023)
Contact:Kousuke Umeda
Fisheries Technology Institute, Japan Fisheries Research and
Education Agency, Aquaculture Research Department; 422-1
Nakatsuhamaura, Minami-ise, Mie 516-0193, Japan
REFERENCE 2
AUTHORS Umeda,K., Matsuura,Y., Shimahara,Y., Takano,T. and Matsuyama,T.
TITLE Complete genome sequences of alpha-glucosidase-positive/negative
strains of Nocardia seriolae from Seriola species in Japan.
JOURNAL Unpublished
COMMENT Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
##Genome-Assembly-Data-START##
Assembly Method :: Unicycler v. 0.5.0
Genome Coverage :: 220x
Sequencing Technology :: BGI DNBseq; Nanopore MinION
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /collection_date="2002-10-24"
/db_xref="taxon:37332"
/geo_loc_name="Japan:Oita, Tsukumi, Tsukumi Bay"
/host="Seriola quinqueradiata"
/isolation_source="muscle isolate from a diseased fish in
a fish farm"
/lat_lon="33.10 N 131.89 E"
/mol_type="genomic DNA"
/organism="Nocardia seriolae"
/strain="024013"
protein /inference="COORDINATES:ab initio
prediction:MetaGeneAnnotator"
/inference="similar to AA sequence:RefSeq:WP_013229302.1"
/locus_tag="NSER024013_50970"
/note="frameshifted, insertion/deletion at around 5254054"
/transl_table=11
BEGIN
1 MPQRDRRIVP GVALRVTVAD AGRLTDRVGL GVLTRVVGRD LVDEVLIETG RVEQRRRLLP
61 ARVVVYFVLA LTLFFDDAYE EVMAKLVSGL RFLRSWEHDW QVPAAPALCK ARARLGEEPL
121 EELFRRVAVP LAGPGCPGAW LAGRRVMAID AVEIDVPDTA DNEAVFGRRR TNTGEQGPYP
181 RAKILAVAEC GTHAVIAAHI GAVDQNDRIL ARALLADFES GMLVIADRGF FGDELWCQAA
241 QTGADLLRRV MAPLKLPVVQ QLPDGSYLSR LTGKSERQRL RRHHRRGLDT AAEGLAVRVV
301 EYEITDRDAE PGPIRLITTL LDPDQISAAE LAAAYVHRWE IETSFAEIET RQRGSFRVLR
361 SQSPAMVRQE IWGLLITHYA IRELMYHTAD FDSVDPLRPS VLRTLRVVRR HVTGQGGFSP
//